Gene Huta_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0121 
Symbol 
ID8382383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp115540 
End bp116352 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID644971180 
ProductABC transporter related 
Protein accessionYP_003129043 
Protein GI257051210 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGGGA CTGAAGTGAA CGAAACCGAC AGTACATTCG CAATCGAGGC TACCGACCTG 
ACGAAGCACT TCGGCGACGT CGTTGCTGTC CAGGACCTCG ATCTGGCCAT CGAACCCGGG
ACCGTCTACG GGTTCCTGGG GCCGAACGGT TCCGGCAAGA CTACCACGAT GCGAATGCTA
ACAACGCTTA CACGCCCAAC CTCCGGCGAG GCCCGAATCG CCGGCATTCC GATCACTGAC
CGAAACGGCG TTATCGAGCA CGTCGGCTAC CTCCCCGAGG AGCCGCCGCT GTTCGACGAG
TTGACCGCCG GCGAGTACCT CCGGCACGTC GCCGCGCTGC ACGACATTCC CGGTGACGAG
GCCGACGAAC GCATCGCGGA CTATCTCGAC CGGTTCGATC TCGCCGAGGC CGCCGACCGC
CGGATCAGTG GCTACTCGAC CGGAATGCGC CAGAAGACCG GACTCGTCGG GGCGATCCTC
CACGAACCGT CAGTGCTCCT CCTCGACGAG CCGACGAGCG GTCTCGACCC GCGGGCTGCC
CGAACCGTCA AGGACCTGAT CGCCGAACTC GCCGCGGGCG AGACGACGAT CTTCCTCTCG
ACGCACATCC TTTCGGTCGT CGAGGAACTC GCCGACGTGG TCGGCGTCCT CCACGACGGC
CGGCTCGTCG CGGAGGGCTC GCCCGCGGCT CTCAAACAGC AGGCCGAGGA AGGTACTGGA
GACACGCTCG AAGATGTCTT CCTTGCAGTG ACGGCGGATC ATACCGAGGA GTACGCGAGT
GCCGAACCAG AGGCTGCGGC CGACGGTGCG TGA
 
Protein sequence
MGGTEVNETD STFAIEATDL TKHFGDVVAV QDLDLAIEPG TVYGFLGPNG SGKTTTMRML 
TTLTRPTSGE ARIAGIPITD RNGVIEHVGY LPEEPPLFDE LTAGEYLRHV AALHDIPGDE
ADERIADYLD RFDLAEAADR RISGYSTGMR QKTGLVGAIL HEPSVLLLDE PTSGLDPRAA
RTVKDLIAEL AAGETTIFLS THILSVVEEL ADVVGVLHDG RLVAEGSPAA LKQQAEEGTG
DTLEDVFLAV TADHTEEYAS AEPEAAADGA