Gene Huta_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0116 
Symbol 
ID8382378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp111169 
End bp111801 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID644971175 
ProductProtein of unknown function DUF998 
Protein accessionYP_003129038 
Protein GI257051205 
COG category[S] Function unknown 
COG ID[COG3371] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.163433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA CACTCACTGA CACCGTGCCG GTTAGGGAAC CCCTGACTGG ACCCCGACGC 
CTCGCCGGCG GCCTCTTCCT CGCGCTCTCG GCGCAGTTCA TGACCGCGAT CATGCTCGCC 
GCAGCGATGG CACCGGACTA CGACTTCGGG GCCGGTGCGA TCAGCGACCT CGGGGTCTTC 
CCCGAGACTG CGCTCCTGTT CAACGGCTCG TTGATACTCG TCGGGATCCT CAACATTGTG 
GGCGGGGTGT ACTTCTATCG CAGCCACGGC AAGCGCTGGC TCCTTTCGCT GTTCGTACTG 
GCCGGCGTCG GCGCAATCGG AACGGGGCTC ATCCCGCTGA ACGTCAGCGA CGCCCACAGC 
CTCTTTGCCC TTGTGGCGTT CCTGTTCTTC AATCTCGAAG CGATCGGCAG CGCAACCCAC 
CTCACCGGAC CGATGCGAGT CCTCTCGATC GTCACGGGGA CGATCGGTCT CGTCTTCCTG 
GTCCTCATGG CGGTCGGCGA CGCCGGGACG ACGGCGGCAT TCGGTCCCAT CGGCCACGGC 
GGCACCGAGC GCATGATCGT CTATCCGGTC ATGATCTGGC TGATCGCCGT CGGTGGCTAT 
CTGTTGGGTG CGGAAGCAGC AACCGATCAA TGA
 
Protein sequence
MTETLTDTVP VREPLTGPRR LAGGLFLALS AQFMTAIMLA AAMAPDYDFG AGAISDLGVF 
PETALLFNGS LILVGILNIV GGVYFYRSHG KRWLLSLFVL AGVGAIGTGL IPLNVSDAHS 
LFALVAFLFF NLEAIGSATH LTGPMRVLSI VTGTIGLVFL VLMAVGDAGT TAAFGPIGHG 
GTERMIVYPV MIWLIAVGGY LLGAEAATDQ