| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0103 |
|---|
| Symbol | |
|---|
| ID | 8382365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 100855 |
|---|
| End bp | 102336 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644971162 |
|---|
| Product | N-6 DNA methylase |
|---|
| Protein accession | YP_003129025 |
|---|
| Protein GI | 257051192 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGA CTCTCGACGA ACTGGACTCT CATCTCTTCA AGTGCGCAGA CATCATCCGT
GACGCTGTTG ACTCGACAGA GTATAAGGAT TTCATCCTTC CGCTGGTGTA CTACAAGACG
ATCTCGGACA ACTTCGAGGT ACAGCGCGAG AAATACGTCG AAGAGTACGG GGATGAACAC
GCCAACCGGC CTAACATCTA CGACGTACCG TATGTCCCAG ACGGCTACCT GTGGGACGAC
CTACGAGCGG TCAACGAGAA CGTCGACGAA GCGATCAACG ACGCTTTCGA CGCCCTTCGT
GAGGCCAACG ACGGCGAGGT CGAGGGCGTG TTCCGGGCTG ACTACGTCGC CGAGGACGCC
CTTACCGACG ATCGACTCAC TCGTCTGATC GAGCACCTAA GCACCATCGA TCTCGATAAC
GACAGCGTCC CGCCGGATAT GCTCGGTGAG GCGTACATGG ACCTCGTGCG CCACTTCGCC
GAGGAGGAGG GCAAGTCCGG CGGTCAGTTC TTCACCCCGC CCCACATCGT CGAGTTGATG
GTCAGGCTGC TCGCCCCCTT CGAGGATGGC GATACGTTCC ACGACCCGAC TGTGGGATCA
GGCGGGATGC TCGTCGAGGC GGCCACCCAC TACCGTGACG AGCAGGGCGG CGATCCCTCG
AAGCTCACGT TCACGGGCCA GGAGATCAAT CCCGATATCG CCGCCATCGC AAAGATGAAC
CTCTCGATCC ACGGCCTCAG CGGGCGGATC GAGCGCGAGG ACTCTCTCCT GCGACCGCAG
TTCACCGAGA ACGGCGAACT GACCAAGTTC GACTACGTGC TCGCGAACTT CCCGTTCTCG
GCGGACTGGC AGAAGGACGA ACTCCAGGAC GACACCTACG GGCGCTTTGA CTGGCACGAG
AAGCTCCCCC GCGCCGACCG GGGCGACTAC GCGTTCATCA TGCACATGGC GGAACAGTTG
AACGAGACCG GCCAGGCGGC CATCGTCATC CCCCACGGCG TGCTGTTCCG CAAGCACGAG
TCCCGCTACC GGGAGCCGAT GCTGGAAAAC GATCTGGTCG AGGCCATCGT CGGCCTGCCC
GAGAACCTGT TCCAGAACAA CTCGATTCCC TCGGCCATCC TCTTGTTGAA CACCGACAAG
CCCGCCGAGC GCGAGGGCGA GGTGCAGTTC ATCCACGCCG CCGACGAGGC CTTCTATCGG
GAACTCTCGA ACCAGAACGA ACTCACCGAC GAGGGCGTGG CCCACGTCGT CGAGAACTTC
CGGGACTGGA CGACCGAGGA GCGCGTCAGT CGGACGGTGT CGATCGAGGA GATCCGGGAG
AACGACTACA ACCTCAACAT CGCGCTGTAC GTCGATACGA CCGAACCCGA GGAAGAGATC
GACGTGGCTG AGGAACTGGC GACGCTCCGG GAGTTGCAGG CCGAGCGCGA CGAGATCGAG
GCGCGGATGG ACCAGCACAT GGAGGCGCTG AACTATGAGT GA
|
|---|
| Protein sequence | MSLTLDELDS HLFKCADIIR DAVDSTEYKD FILPLVYYKT ISDNFEVQRE KYVEEYGDEH
ANRPNIYDVP YVPDGYLWDD LRAVNENVDE AINDAFDALR EANDGEVEGV FRADYVAEDA
LTDDRLTRLI EHLSTIDLDN DSVPPDMLGE AYMDLVRHFA EEEGKSGGQF FTPPHIVELM
VRLLAPFEDG DTFHDPTVGS GGMLVEAATH YRDEQGGDPS KLTFTGQEIN PDIAAIAKMN
LSIHGLSGRI EREDSLLRPQ FTENGELTKF DYVLANFPFS ADWQKDELQD DTYGRFDWHE
KLPRADRGDY AFIMHMAEQL NETGQAAIVI PHGVLFRKHE SRYREPMLEN DLVEAIVGLP
ENLFQNNSIP SAILLLNTDK PAEREGEVQF IHAADEAFYR ELSNQNELTD EGVAHVVENF
RDWTTEERVS RTVSIEEIRE NDYNLNIALY VDTTEPEEEI DVAEELATLR ELQAERDEIE
ARMDQHMEAL NYE
|
|---|
| |