Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0078 |
Symbol | |
ID | 8382338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 79999 |
End bp | 80448 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644971136 |
Product | iron (metal) dependent repressor, DtxR family |
Protein accession | YP_003129000 |
Protein GI | 257051167 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.305356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCATC ACAGCGAGTC CGCCACGAGC GAGAGCGTGG AGATGTATCT CAAGGAGATA TACCTCCTCT CGCGGGACGG CGAGGCGGCG CGAACCGGCG CGATCGCGGA TCGACTCGGC GTCTCGCCGC CCAGCGTCAC GCAGATGCTC TCGCGGCTGC AGGAACAGGA TCTTCTCGAA TACCAGAAGC GCAGGGGTGC TGAACTCACG GAGCGGGGGA CCGAACAGGC CAGAGATCTG CTCGCCAAGC ACTGCCTCAT CGAGCGATTC CTCGTCGAGG GGCTGGACGT GACCGACGGC TTTCACGACG AGGCGTGCCG TCTCGAACAC GCGCTCAGCG ATGACGTCGC CGCCCGGTTA ACCCGATACG TCGAGCGTCG CCCCGAGTGT CCGGACTGCT ACGATGCCGA GGCAAAACAT TGTCAGCATC TCGAAATCGA ACCGGAATAA
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Protein sequence | MSHHSESATS ESVEMYLKEI YLLSRDGEAA RTGAIADRLG VSPPSVTQML SRLQEQDLLE YQKRRGAELT ERGTEQARDL LAKHCLIERF LVEGLDVTDG FHDEACRLEH ALSDDVAARL TRYVERRPEC PDCYDAEAKH CQHLEIEPE
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