| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0060 |
|---|
| Symbol | |
|---|
| ID | 8382320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 61419 |
|---|
| End bp | 62732 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644971118 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003128982 |
|---|
| Protein GI | 257051149 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGCG TCGTCGGCGG CGGAGTCGCG GGGCTGGCAA CGGCCCGTCG GCTGCTGGAG
CAGGGACATC AGGTAACCGT GTTCGAAGCG AGTGAGGACC TCGGTGGGTT GGCGGCGACC
TACGAAACGG CCGGGCACCC GATCGAGCGG TACTATCACC ATCTCTCGAA GTCCGAAGAG
ACGATCGTCG AGTGGATCGA CGAACTCGGC CTCGAATCCG ACCTGGCGTG GGGGTACAGC
AGTACCGCAT ACTACGTCGA CGGGGTCGTC CATCCGATGG ACAAACCCTG GGAGATCCTC
GCCTACCCGC ACCTCTCGGT CTACGACAAG TTCCGCCTTG GCATGCTCGT TCTGGATATA
GACGTTCGCG GTGGCATTCC CTCGTTCGAC ACCTACGAGC GACTCGAAGA CTTCGAGGAC
GTTCCAGTGA AGGAGTTCAT CATCGATCAC ACGTCCCGCG GGTGCTTCGA GCGGTTCTTC
AAGCCACTGC TGGAAGCGAA ATTCGGCGAT CGATGGGATG ACGTCAGTGC TGCCTGGCTC
CTGGGACGCG TGAAGTTCCG GGGCGAACGG GACCCACTCA GGGGGGAATT ACTGGGCTAT
CCAATGGGTG GATTCGGTCG CCTGATCGAC GCGCTGGTCG ATGCCGTCGG AAAGATGAAC
ATTTTCACGG GATCGCGAGC GGTCGACATC GGTATCGAAG GCGGTGCCGT CAAGTCCGTG
ACCGTCGAAA CGGATCAGGG GAAGGTCCCA CACGCCGTCG ACGGCGTCGT CATCGCCACG
ATGCCCGACG TGCTGGAATC CCTGACGGGC TACGAGTGCG AGATCGACTT CCAGGGCACC
GTCTGTTCAG TCATCAGTCT GGAGGAGGCG CTGACGGACA CGTACTGGCT CAACATCGCC
GACGACGCTC CGTTCGGCGC GCTCATCGAA CACACTAACC TCGTCTCAGC AAAACAGTAC
GGTGGCGAAC ATCTGTTGTA CGCCGTCAAA TACATCCAGG ATCGCGAGGA CGAACTCTGG
CAGATGGACG ACGAGGGCGT CGAGGAAACC TGGCTCACCG GCATCGAGGA CCTGTTTCCG
GAGTTCGATC GCGAGTCAGT CAACTGGATC GAAACCTCGC GAAGTCCGAA GACGGCACCC
ATCTACGAGC GGGGCTATCT CGAGAAAGTC ATCCCGTATG ATCTGAGCGA GTACGTAGCC
GAAGGCGTCT ACTACGCCGG CATGGCGTCG CGAGCCCAGT ACCCGGAACG CTCGCTCAAC
GGCGCGATCG TTGCCGGCGA GACCTGCGCC GAGTTGATCG ACCACGACGA GTAG
|
|---|
| Protein sequence | MIGVVGGGVA GLATARRLLE QGHQVTVFEA SEDLGGLAAT YETAGHPIER YYHHLSKSEE
TIVEWIDELG LESDLAWGYS STAYYVDGVV HPMDKPWEIL AYPHLSVYDK FRLGMLVLDI
DVRGGIPSFD TYERLEDFED VPVKEFIIDH TSRGCFERFF KPLLEAKFGD RWDDVSAAWL
LGRVKFRGER DPLRGELLGY PMGGFGRLID ALVDAVGKMN IFTGSRAVDI GIEGGAVKSV
TVETDQGKVP HAVDGVVIAT MPDVLESLTG YECEIDFQGT VCSVISLEEA LTDTYWLNIA
DDAPFGALIE HTNLVSAKQY GGEHLLYAVK YIQDREDELW QMDDEGVEET WLTGIEDLFP
EFDRESVNWI ETSRSPKTAP IYERGYLEKV IPYDLSEYVA EGVYYAGMAS RAQYPERSLN
GAIVAGETCA ELIDHDE
|
|---|
| |