| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0057 |
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| Symbol | |
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| ID | 8382317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 56900 |
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| End bp | 58165 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644971115 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003128979 |
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| Protein GI | 257051146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.185804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGTC GTTTTTTCAC GTGGCCGACA GTGGTCACCG TCACAGTAAC ACCCAAGTCC
GTTCATCCCG CTGTGCCCTG TATGGTCTCT CTTGTCTCCA TGGTCTCGGA ATTTCGGCAG
TTTCTGGAGG AGTTGGCAAC GACGGAAGCA CGCATCGCCG CGAGCGTCGG CGTCGCGGTA
CTCGCGATCA TTATTGCGGC GTTCGTCCTT CCGTTCGGCC TCGAACGAGC GTATCGGCTC
ATCGCGACCC GTCTCGGGAC AAGTCGTGTT GCCGACGGGG TTCGCCTCGT CGGCGGGTAC
GTTCCAGGTA CCGTCGCCGA GGGCTTCGTT CGTCTGGTGC AGGTACTGGT CCTGGCGGCG
GCCGGGATTT CATTGCTGGT TATTTGGGGA CTCGTCGACA CCGCCGAGAT GGTGCTCACG
TATTTCAGTG GGTCAGTTCC TTTCCTCGGC CGTGTGGGGT TGACACTACT GTTCGCCCTG
CTGGCGTACG TCGGCGCCGA CCAGTACAAG CAGATGGTCG TCCGGATCGG GGAGGAGGCC
ACCTGGCTGA CCGATCATCA ACGGGAGATC GTCATCAGGA TGGGGCAGAT AGCGATCCTT
CTGGCTGCCG GACTGATTAT TCTCACCGTC TGGGGGATCA ATCCGGAGGG GCTGTTGGTC
GGCGCGGGCT TTCTCGGCAT CGTCGTCGGC CTCGCGGCCC GCCAGACGCT GGGCGCGCTG
ATCGCCGGCT TCGTGTTGAT GTTCTCGCGC CCGTTCGAGA TCGGTGACTG GGTCGAGATC
GGCGACCAGG AGGGCGTCGT CACCGACATT ACGATCATGA ACACGCGCCT GGAGAACTTC
AACGGCGAGG TCGTCTATCT GCCGAACGAC CGCGTCAACG AACGGGCGAT CGTCAACCGG
AGTCGACGGG GATCACTTCG CCTTCGTGTC GACGTCGGTA TCGACTACGA AACCGATCCG
GAACACGCCA AGAATGTCGC CATGGAGACC ATCAAGCAGA TCGACATCAT CGCGGACGCG
CCCCCGCCAC AGATCGTCCC GAAGTCCTTC GGCGATTCGG CGATCGTCCT CGAGATGCGT
TTCTGGATCG ATCACCCGAC ACCACCCCGG AAGTGGAACG CGACCGAGCG GGTCGTTACC
CAGGTGAAAG CAGCCTTCGA CCGCGAGGGG ATCAAGATCC CGTTCCCGCA GCGTGAACTC
AGCGGCCGGG CCGAAACCAA CGGCTTCCGT GTGCAGCAAT CAGAAAACAC GGTCGACGAC
GCCTGA
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| Protein sequence | MTSRFFTWPT VVTVTVTPKS VHPAVPCMVS LVSMVSEFRQ FLEELATTEA RIAASVGVAV
LAIIIAAFVL PFGLERAYRL IATRLGTSRV ADGVRLVGGY VPGTVAEGFV RLVQVLVLAA
AGISLLVIWG LVDTAEMVLT YFSGSVPFLG RVGLTLLFAL LAYVGADQYK QMVVRIGEEA
TWLTDHQREI VIRMGQIAIL LAAGLIILTV WGINPEGLLV GAGFLGIVVG LAARQTLGAL
IAGFVLMFSR PFEIGDWVEI GDQEGVVTDI TIMNTRLENF NGEVVYLPND RVNERAIVNR
SRRGSLRLRV DVGIDYETDP EHAKNVAMET IKQIDIIADA PPPQIVPKSF GDSAIVLEMR
FWIDHPTPPR KWNATERVVT QVKAAFDREG IKIPFPQREL SGRAETNGFR VQQSENTVDD
A
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