Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0056 |
Symbol | |
ID | 8382316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 55964 |
End bp | 56869 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644971114 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_003128978 |
Protein GI | 257051145 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0183789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAA CCGATCTCGA AGATCTACGT CGGGGTACTG ATCTCGTCAA GCGTGGCTTC GCGAAGATGC AAAAGGGCGG CGTCATCATG GACGTCGTCA GCCCGGAACA GGCCCGGATC GCCGAGGACG CCGGTGCTGT CGCCGTGATG GCCCTAGAAG CGGTCCCGGC GGACATCCGC AAGCGCGGCG GCGTCGCGCG GATGGCCGAC CCGGCGGATA TCCAGGAGAT CATCGACGAG GTTTCGATCC CGGTAATGGG CAAGTCCCGG ATCGGCCACA CCAAGGAAGC CCAGATCCTC GAAGCCATCG GCGTGGACAT GGTCGACGAG AGCGAGGTCC TGACGCCCGC CGACGACGCC TATCACATCG ACAAGCGCGA CTTCACGACC CCGTTCGTCT GCGGGGCGCG CAACCTGGGC GAGGCCCTGC GTCGCATCGA CGAGGGCGCG GCGATGATCC GGACGAAAGG CGAGGCCGGC ACGGGCGACG TCAACCAGGC CGTCCACCAC CAGCGAACGA TCAAGGGCGC GATCCGCCAG TTGGAGGGGA TGAGCCACGA GGAGCGCGAG GCATGGGCGC GTGAGCACGA AGCCCCAGCC GAACTCGTCC ACGAGACCGC TGAGATGGGT CGTCTCCCAG TCGTCAACTT CGCCGCCGGT GGGATCGCGA CGCCTGCGGA TGCCGCACTG ATGATGCACC ACGAGTGTGA CGGCATCTTC GTCGGGTCGG GTATCTTCGG TGCGGCGGAC CCCGAGGCGA TGGGTCGGGC GATCGTCGAG GCCGTCAACA ACTACGACGA CCCCGAACGG CTGGCCGAGA TCGCTGCCGG GACCGGCTCC GGGATGAAGG GCGACGCCAA CGTCGACCTG CCGGAAGACG AGCAGTTGCA GGGCCGAGGC GTCTGA
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Protein sequence | MTETDLEDLR RGTDLVKRGF AKMQKGGVIM DVVSPEQARI AEDAGAVAVM ALEAVPADIR KRGGVARMAD PADIQEIIDE VSIPVMGKSR IGHTKEAQIL EAIGVDMVDE SEVLTPADDA YHIDKRDFTT PFVCGARNLG EALRRIDEGA AMIRTKGEAG TGDVNQAVHH QRTIKGAIRQ LEGMSHEERE AWAREHEAPA ELVHETAEMG RLPVVNFAAG GIATPADAAL MMHHECDGIF VGSGIFGAAD PEAMGRAIVE AVNNYDDPER LAEIAAGTGS GMKGDANVDL PEDEQLQGRG V
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