Gene Huta_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0054 
Symbol 
ID8382314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp52936 
End bp53913 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content65% 
IMG OID644971112 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_003128976 
Protein GI257051143 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0349471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGACG CACTCGTCTA CGACGGGACC GGCGTCGAGT CCGTCGAGGA TATCGCCGCC 
GCACGCGCGG CAGACGGAAC AACGTGGGTC CACGTCGAGG ATGCGAGCGA CGCGGAGATC 
GATGCCGTCG CCGACGCGTT TGACCTCCAC GCGCTGGCGA TCGAGGACGT GCGCAACAAC 
GTCCGGGCGA AGGCCGAGGA GTTCAGCGCC CACACGTTCG CCCTGGTCAA GACCGCCCGC 
CTCACGCGGG GCGAGACCAC CTTCGAGGAG GAGATCGACG ACGAGCCGGT TGGCCTCTTC 
ATCGGCGATG ACTGGCTGGT CACCGTCGCC ACCGGCAGCG CCGACCCGGT CGCTCGTGTT 
CAGGAGAGCG TCCGTCGTGG GGACGAACGG CTGCTCGAAC GGGGGCCGGA TTTCACCGCC 
TATCGAGTTC TGGACGTGCT CGTCGACAGC TACTTCGAGA TCCTCGAACA TCTAGAGGGC 
CAGATCGAGG CCATCGAGGA CGAGGTCGTC GAGTCGCCCG ACGCCGACCT GCTCGGGGAG 
ATCAACAGCG TCCGCCGGGA GTTACTGTCG TTCCGGAAAG TCGTCTGGCC CGTCCGGGAG 
ACGCTCGCCG TCCTGGCTCG TGGCGATGTC CGTGGTATCC AGCCGGACAC CCAGAAGTAC 
TACCGCGACG TCTACGATCA CCTGGTGCAA CTCGTCGACT TGCTGGAGAC GTACCGTGAT 
CTGGTGGTCG GGACGCGGGA CATCTATCTC AACGCCCTCT CACAGTCGAC CAACGAGGTG 
ATGAAGGTCC TGACCGTCGT CGCGACGATC TTCATCCCGC TGACCTTCGT CGCCGGCGTC 
TACGGCATGA ACTTCTCCGG CGGGCCGTAC AACATGCCCG AGTTGACCTG GGAGTTCGGC 
TATCCCGCTG TCATGCTCGG CATGGCCGGC GTCGCGGCAC TGATGGTGTT TTACTTCCGG 
CGGCAGTCGT ATCTCTGA
 
Protein sequence
MIDALVYDGT GVESVEDIAA ARAADGTTWV HVEDASDAEI DAVADAFDLH ALAIEDVRNN 
VRAKAEEFSA HTFALVKTAR LTRGETTFEE EIDDEPVGLF IGDDWLVTVA TGSADPVARV 
QESVRRGDER LLERGPDFTA YRVLDVLVDS YFEILEHLEG QIEAIEDEVV ESPDADLLGE 
INSVRRELLS FRKVVWPVRE TLAVLARGDV RGIQPDTQKY YRDVYDHLVQ LVDLLETYRD 
LVVGTRDIYL NALSQSTNEV MKVLTVVATI FIPLTFVAGV YGMNFSGGPY NMPELTWEFG 
YPAVMLGMAG VAALMVFYFR RQSYL