Gene Huta_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0048 
Symbol 
ID8382308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp48634 
End bp49728 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID644971106 
Productoxidoreductase domain protein 
Protein accessionYP_003128970 
Protein GI257051137 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTACG ACGTCGCCGT CGTCGGAACG GGTGCGGAAC CCGAGAACCC GACAACGGAC 
AGCTGGTCGA TGGCGTATCG CCACGCGGAA GCCTACGAAC GTAACGACGA GACACGGCTG 
GTTGCCGCGG CCGACCGGCA CTCCGATCGC GTCGAAGCAT TCGCGGAGAC GTTCGACCTG 
CCTGAGGACG GCCGGTTCTC GGACGCGATC GAGCTGTTCG ACGCCGTCGA TCCCGACGTG 
GTGAGTCTGA CGGTCCCGCC CGAGGCTCAC GCAGACCTCA CGGTGGCCGC TGCCCGTCGC 
GGCGTCGAGG CGATCCACTG TGAGAAGCCG ATGGCAGCCA CGTGGGCCGG CGCACAACGG 
ATGGCACAGG CAGCCTGGCG GGCCGACACC CAGTTGACGT TCCACCGAAT GCGTCGCTTC 
GGCCGGCCGT TTCGGGCCGC GACGGAACTA CTCGACGCGG GTGAGATCGG CGACCTCCAG 
CGGGTCGAGA TCGGGTGGGA CGACTTCTAT GACACCGGCG CACACAGCAT CGACCTCGCG 
GGGATGTTCG CCGGCGAGCC CCAGGCAGAG TGGGTCCTCG CACAACTCGA TTACCGCGAG 
GAAGATGTCC GCTTCGGGAT GCACCAGGAG AACCAGATGC TCGCCCAGTG GACGTACGAC 
AACGGCGTCG ATGGGCTCCT TTCGACGGGC GATCGATCCG ACCTGGTCGG GGCCGCGTTT 
CACCTCGTCG GCAACGATGG CGAAATCCGA ATCGACGCCG ACGACGGCCC GATGCTTGAA 
GTCCGGCGAG CCGGCTCAGG GACGTGGGAG ACGGTCGACG TCGACGGCGA GACGCTCCAT 
CACGCCGGAA CGGGTGAGTA CGAATACGGA AACGCCTATC ACCAACGAGC GATCGACGAC 
GTGATCGACG CCGTCGGGAG CGACCGCGAG TCCGAACTTC GGGCGCGTCA TGGGCTGAAC 
ACCGCCGAGA TAATTTTCGG CGGGTATGAA TCAGTTCGCC GGCGTGGGCG CGTCGACTTC 
CCGCTGACGA TCGACGACAA TCCGTTCGAG GCGATGGTGG CGGCGGGCGA GGTCGGCCCC 
GACAGCGAAA CGTAG
 
Protein sequence
MTYDVAVVGT GAEPENPTTD SWSMAYRHAE AYERNDETRL VAAADRHSDR VEAFAETFDL 
PEDGRFSDAI ELFDAVDPDV VSLTVPPEAH ADLTVAAARR GVEAIHCEKP MAATWAGAQR 
MAQAAWRADT QLTFHRMRRF GRPFRAATEL LDAGEIGDLQ RVEIGWDDFY DTGAHSIDLA 
GMFAGEPQAE WVLAQLDYRE EDVRFGMHQE NQMLAQWTYD NGVDGLLSTG DRSDLVGAAF 
HLVGNDGEIR IDADDGPMLE VRRAGSGTWE TVDVDGETLH HAGTGEYEYG NAYHQRAIDD 
VIDAVGSDRE SELRARHGLN TAEIIFGGYE SVRRRGRVDF PLTIDDNPFE AMVAAGEVGP 
DSET