Gene Cpin_7289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7289 
Symbol 
ID8363483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9112975 
End bp9113346 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content42% 
IMG OID644969422 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003126889 
Protein GI256426236 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCA AAGACACGCA GGCTATATAT CTCCAGATCG CCGATTATAT GTGCGAGCAG 
ATGTTGCTTG ACAAGTGGAA ACCAGAGGAC AGAATTCCTT CGGTGAGAGA ACTGGCGGTA
CAGCTGGAAG TGAATCCCAA TACGGTGATG CGCACTTGTG AATATCTACA GCAATACGAT
ATCATCTATA ATAAAAGAGG GATTGGTTAC TTTGTCGCAG CTGGTGCATC CAGGAAGATC
AAGCAATTGA AAAAGGAACA GTTCATGGCG AATGAGTTGC CACAGTTCTT CCGCAGTATA
TATCTGCTGG ATGTAGAGCT GGATGAACTA AAGACGCATT ACGAGAAGTT TAAAAAATCT
CATTTCAAGT AA
 
Protein sequence
MEFKDTQAIY LQIADYMCEQ MLLDKWKPED RIPSVRELAV QLEVNPNTVM RTCEYLQQYD 
IIYNKRGIGY FVAAGASRKI KQLKKEQFMA NELPQFFRSI YLLDVELDEL KTHYEKFKKS
HFK