| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7280 |
|---|
| Symbol | |
|---|
| ID | 8363474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 9100770 |
|---|
| End bp | 9101933 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644969413 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003126880 |
|---|
| Protein GI | 256426227 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTA AGTTAAGAAT GGGAATGATC GGAGGCGGTA AGGATGCCTT CATCGGTGCT
ATTCACCGTA TTGCTGCCAA TATGGACGGC CTGATCGAAT TGAAAGCTGG TGCGCTGAGT
GTAAATCCTG AAGTAGCGAT TGAATCCGGG AAAATATTAT TCCTGGACCC TGCACGCACC
TATACTGACT ACAAGACCAT GCTGGAAAAG GAAGCTGCGC TGCCTGAAAG TGAAAGACTG
GATTTTATAA CCATCGTTAC ACCCAACTTC GCACACTTCG AACCTGCGAT GATGGCGCTG
GACAAAGGCT TTAACGTCGT GATCGAAAAA CCGATCACCT TTACCCTCGA TGAGGCTAAA
CAAATCAAGG CTAAAGTAGA AGAAACAGGT CTGACCCTGC TACTGACGCA TACTTATACG
GGTTATCCGC TGGTAAAACA GGCCCGCCGT ATGGTGGCTG ACGGCGTATT GGGTAAGATC
CGTAAGGTTT GGGTAGAATA CCCACAGGGT TGGCTGAGCC GCGCTACTGA AAAAGATAGT
GCCGGTGCTG CCTGGAGAAC AGATCCTAAA CGTTCCGGTA AAAGCGGATG TTTTGGAGAT
ATCGGTACCC ATGCTGCGAA CCTGGCTGAA TATATCAGTG GTCTGAAAAT AGAAAAACTG
TGTGCTGACC TGAACATCTT TGTGGAAAAC CGTGCTTTGG ATGATGACGG CGCTGTGCTG
TTGCGTTTTG ACAATGGCGC TGCTGGTGTG CTGATGGCAT CCCAGGTGGC TGCCGGTGAA
GAAAATGCGC TGAAAATCAG AATATATGGT GAGAATGGTG GTCTGGAATG GGCACAACAC
GAACCAAATA CCCTGCTGGT AAAATGGCTG GATAAACCAA CCGAAATCTA TCGTGCAGGT
AGTGGTTATG GCACTTACCA GAGCAGCTAT GCGATCCACA ATACGCGCAC ACCGGGTGGT
CATCCGGAAG GATACCTGGA AGCATTCGGT AACCTCTACC GCAACTTTGC ACAGACTTTA
CAGGCTAAAA TCGATGGTCA GACTCCGTCT CCTGAATCAC TGGATTTCCC GGGGGTAGAA
GAAGGTATCC GTGGTATGGC GTTCATCGAT AACGTGGTGA AATCGAGCCA GAGCACAGAG
AAATGGACAA CGTTTGAATT ATAA
|
|---|
| Protein sequence | MNRKLRMGMI GGGKDAFIGA IHRIAANMDG LIELKAGALS VNPEVAIESG KILFLDPART
YTDYKTMLEK EAALPESERL DFITIVTPNF AHFEPAMMAL DKGFNVVIEK PITFTLDEAK
QIKAKVEETG LTLLLTHTYT GYPLVKQARR MVADGVLGKI RKVWVEYPQG WLSRATEKDS
AGAAWRTDPK RSGKSGCFGD IGTHAANLAE YISGLKIEKL CADLNIFVEN RALDDDGAVL
LRFDNGAAGV LMASQVAAGE ENALKIRIYG ENGGLEWAQH EPNTLLVKWL DKPTEIYRAG
SGYGTYQSSY AIHNTRTPGG HPEGYLEAFG NLYRNFAQTL QAKIDGQTPS PESLDFPGVE
EGIRGMAFID NVVKSSQSTE KWTTFEL
|
|---|
| |