| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7279 |
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| Symbol | |
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| ID | 8363473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9099585 |
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| End bp | 9100640 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644969412 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003126879 |
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| Protein GI | 256426226 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA TAAAGGGGCC TGGTATTTTC CTGGCGCAGT TCCTCGGAGA CACTGCGCCT
TTCAATAGCC TGGATAGTAT TTGTAAATGG GCGGCGGAAT CAGGTTTTAA AGGTGTACAG
ATCCCTACGT GGGATCCACG TATGATCGAC CTGCAGAAAG CTGCTGAAAG CAAGACGTAT
GCAGACGAGA TCAAAGGCAT TGTAAATGCC GCAGGACTGG AAATCACCGA ACTGTCTACG
CACCTGCAGG GACAGCTGGT AGCTACCCAT CCTGCATATA ACGAACTGTT TGACGGCTTC
GCGCCTGCTG ATAAAAGAGG TAATGCTGCT GCCCGTACCG AATGGGCGGT AAATCAGCTG
AAATATGCTG CTAAAGCGAG CAGGAACCTC GGCTTAAATG CACATGCTAC TTTCAGTGGA
GCACTGATGT GGCATACTGT ATACCCATGG CCGCAGCGTC CTGCTGGTCT GGTAGAAACA
GGATTCAAAG AACTGGCTAA TCGCTGGTTG CCGATCCTGA ATGAGTTTGA TGCGAATGGC
GTCGACCTCT GCTATGAGAT CCATCCGGGC GAAGATCTCC ATGACGGCGC TTCTTACGAG
CGTTTCCTGG AAGCAACCGG CAACCATAAC CGTGCCTGCC TGTTGTACGA TCCAAGTCAC
TTCGTACTGC AATGCCTGGA TTATCTGCAA TACATCGATA TCTATCATGA AAAGATTAAG
ATGTTCCATG TGAAAGATGC AGAATTCAAT CCAACCGGTC GTTCCGGTGT ATATGGCGGT
TACCAGGGAT GGATCGACCG TCCGGGTAGA TTCCGTTCAC TGGGCGACGG ACAGGTAGAT
TTCAAAGCGG TGTTCAGCAA GCTGACACAG TATGATTTCA CTGGCTGGGC TGTCATGGAA
TGGGAGTGCT GTATCAAGCA TCCGGAAGAC GGAGCAAGAG AAGGTGCGCC GTTCATCAAG
GATCACATCA TCCGCGTAAC TGAAAAGGCA TTTGATGACT TTGCAGGAGG TGGAGCGGAT
GAGGAATTGA ATAGGAAGGT GTTAGGAATC AACTAG
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| Protein sequence | MKTIKGPGIF LAQFLGDTAP FNSLDSICKW AAESGFKGVQ IPTWDPRMID LQKAAESKTY
ADEIKGIVNA AGLEITELST HLQGQLVATH PAYNELFDGF APADKRGNAA ARTEWAVNQL
KYAAKASRNL GLNAHATFSG ALMWHTVYPW PQRPAGLVET GFKELANRWL PILNEFDANG
VDLCYEIHPG EDLHDGASYE RFLEATGNHN RACLLYDPSH FVLQCLDYLQ YIDIYHEKIK
MFHVKDAEFN PTGRSGVYGG YQGWIDRPGR FRSLGDGQVD FKAVFSKLTQ YDFTGWAVME
WECCIKHPED GAREGAPFIK DHIIRVTEKA FDDFAGGGAD EELNRKVLGI N
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