| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7275 |
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| Symbol | |
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| ID | 8363469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9093660 |
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| End bp | 9097076 |
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| Gene Length | 3417 bp |
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| Protein Length | 1138 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969408 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003126875 |
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| Protein GI | 256426222 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases
[COG4654] Cytochrome c551/c552 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000186518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA GGTACGTAAT GATGATGCTG GCGTTACTGG TAACAGTAAT GTCCGGCTGC
CAGCAGAAAG CCCGGCCCGG TAATCCGAGA GTACTGGTGT TTACCAAAAC CGCAGGTTTC
CGGCATGCAT CTATCCCTGC CGGGATACAG GCTATCCAGA AACTGGGAAA AGAAAATGGC
TTCGAAGTAG ATACTACGGA GAATGCTGCA AATTTCACAG AAGACACGCT GCAAAAATAT
GCAGCAGTTA TTTTCCTGAA CACGACCGGC GATGTGCTGG ACAATTACCA GGAAGCAGAT
TTCGAAAGAT ATATTCAGTC CGGCGGTGGA TTCGTAGGTA TCCACGCCGC TACCGATACT
GAATATGAGT GGGGATGGTA TGGTGAACTG GTTGGTGCTT ATTTTGATAA TCATCCTGCC
GGCACACACA AAGCGAAACT GACCGTAAAG GACAAATCTT TCCTGGCAAC CGCTACGCTG
CCTGATACAT GGGAGCATAC TGACGAATGG TACAACTTCA AAAAGATCAA CAAGAACACG
CACAAGCTGA TCACTGTTGA TGAAAAAACA TATGAAGGCG GTACCAATGG CCCTGAACAT
CCTATCAGCT GGTACCATGA GTTTGATGGT GGCCGCGCTT TCTATACTGA ATTAGGACAT
ACGAACGAAT CTTATTCCGA ACCTGAATTC CTGGCGCATG TCCTGGGTGG TATCAAATAT
GCCATCGGTA AAAATACCCT GCTGGATTAT GCACAGGCAA AGACATTACG TGTACCTGAA
GAAAACAGGT TTACGAAAAA CGTGCTCATT ACCGGCGAGT TCTTTGAACC AACGGAAATG
ACCATTCTCC CTGATCTCAA CATCCTGGTG GCACAACGCC GTGGAGAGAT CATGTATTTC
AATCAGACCA GCCGTAAACT GACACAGGCG GGCTTCCTGC GTGTGTATTA CAAAACAGAA
ACACCGAATG TGAATGCAGA GGAAGGTGTA CTGGGTTTAG CGGCAGATCC TGATTTTGCC
AAGAATCATT ATGTATATGT TTATTATTCT CCGGCAGACA CTTCTGTAAA CAGATTGTCC
CGTTTCAAGT TTGAGAATAA TGTGCTGGAT ACTGCTTCTG AGAAAGTAAT TCTCCAGTTA
TATTCACAGC GTAATATCTG CTGCCATACC GGTGGTTCTA TTACCTTCGG TCCTGGTGGT
TTATTATATC TCTCTACCGG TGATAACAGT ACGCCGTTTG ACGAACCAGG ACAGAAATAT
GTCAGCAATG GTTATGGTCC GCTGGACGAT CGTCCGGGAC ATCTGCAATA TGATGGCCGT
CGTACATCTG CTAACTCAAA TGACCTGCGT GGTAAGATCC TCCGTCTGAA GATCAATGAG
GATGGCACCT ACAGTATTCC TGACGGTAAC CTGTTTAAAC AGGGCACGGC AAATACCCGT
CCTGAGATCT ATGCCATGGG AACCCGTAAT CCTTACCGTA TCTCTGTTGA CCGTAAAAAC
GGTTATGTGT ACTGGGGTGA AGTAGGACCT GATGCAAATG ATGATAAGCC GGATCGTGGT
CCGCGTGGAT ACGATGAGAT CAACCAGGCA AAGAAACCGG GCAACTTCGG TTATCCGATG
TTCGTAGGTA ATAACTATGC TTATCACCTG TACGATTATG AAACAGGTAA GAGCGGTCCG
GCATTCGATC CTGCGAAGCC GGTGAATAAC TCCCGCAACA ACACGGGTAT CAAAGATCTG
CCACCAGCAC AACCAGCGTT TATCTGGTAT CCATATGCGA AATCTCCGGA TTTCCCTTCC
ATGGGTAGCG GTGGCCGTAA CGCAATGGCG GGACCTGTAT ATTACAATGA GTTCTATCCG
AAGGAAACCC GTTTCCCGGA TTACTATAAC AACAAGCTGT TTATCTATGA CTGGGTACGT
GGTTGGATAA AGGCGGTTAC GTTTGACAAG GACTATAACC TGTCTAAAAC GGAAGACTTT
ATGCCGAATA CCAAGTTCAA TGCCATTATC GATATGGAAA TGGGACCGGA TGGTCGCATT
TATGTATTGG AATATGGTAA TGGTTGGTTT AGCAAGAATA AAGATGCTGG TCTGGCGCGT
ATTGACTATA ATGGTGGTAA CCGTGCACCG TTGGCAGAGA TACATGTGGA TAAACTGTCA
GGCGGTTTAC CATTCAAAGT GAAACTGAGT GCCAAAGGTT CTTCCGATCC GGATGGCGAT
CAGCTGACTT ACATCTGGTA CCTGGGTAAC GGTAACAAGA AAGAAACGAA GGAACCGGAA
ACAGAAGCTA CGTTTGCAAC CGCAGGCGAA TATGCAGTAT CAGTAGAAGT GGTAGATAAC
AATGGCGCCA GCACGCGCAG TAAAGGTGTC GAACTGTATG CAGGTAATGA AACACCGCAG
GTGAAAGTAA ATGTGGCTGG TAACACCATG TTCTACTTCT CCGGTAAACC TGTTGCGTAT
AACATTGCTG TCAATGATAA GGAAGACGGT TCTACTGCTG ATGGAAAGAT CGATGTAGCC
AACCTGTATG TGAGAGCGGA ATACATGGAA GGAAATGACA AGGCACAGGC GCCTCAGCAG
GGCCACCAGA TCATTACCGG TGCAATTGCT GGTAAGAACA TCATGGAAGC AAGTGATTGT
AAGACCTGTC ATAAGCCAGA TGAAAAATCT ATCGGACCAA GCTTCAAGCA GGTAGCAGAG
AAATATAAAG ACGACGCGAA AGCGCCTGAT TATCTCGCTA ACAAGATCAT ACAAGGCGGT
GGCGGTGTAT GGGGTGAAAC AGCGATGTCT GCACATCCTA CTTTGTCACA GTCGGAAGCG
CATCAGCTGG TAGAATATAT CATGTCAGTA GGTGGTGGTA ACAAACAGGC GCCATCATTG
CCGGTAAGCG GCACCATTGA TCCGACCACA GGTAAACCTG AAAAGGACAA TGGCGTATTG
TACCTGATGG CGAGCTATAC TGATAAAGGC GGACCAGGTA TCAAACCAAT TACTGGTACA
GATGCGGTGT CTCTGAGAAG TCCGAAGATC CCTGCACCTT CTTTTGATAA ATCTGATGCG
GTATCTACAT TCGAATTCGA CGGTAAAAAA CTGTTAATTC CAACAGCTAA CGGATGGGTT
ACTTATAATG GTATCGATCT GACGGCGGTA ACAGGTATCG ATGTAATATA CTTCACACAG
GAGCCATTGA AATACGGTTA TACTGTTGAA ATATTCCTGG ATAAAGCAGA AGGTGTGAAA
CTGGGAGAAA CTTTGATTGG TGTGGGAGCG AAAGCGAAAG CACCAAACAC GGCAAACATC
TCTTTTGCGC CAGTGGCGGA TGGAAAGAAA CATACATTGT ATGTACGTCT TAAATCTGCT
GATCCGGCTG AGAAAGGTAA TCTGGGTATT ACCACGTTCC AGCTGCTGAG TAAGTAA
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| Protein sequence | MQIRYVMMML ALLVTVMSGC QQKARPGNPR VLVFTKTAGF RHASIPAGIQ AIQKLGKENG
FEVDTTENAA NFTEDTLQKY AAVIFLNTTG DVLDNYQEAD FERYIQSGGG FVGIHAATDT
EYEWGWYGEL VGAYFDNHPA GTHKAKLTVK DKSFLATATL PDTWEHTDEW YNFKKINKNT
HKLITVDEKT YEGGTNGPEH PISWYHEFDG GRAFYTELGH TNESYSEPEF LAHVLGGIKY
AIGKNTLLDY AQAKTLRVPE ENRFTKNVLI TGEFFEPTEM TILPDLNILV AQRRGEIMYF
NQTSRKLTQA GFLRVYYKTE TPNVNAEEGV LGLAADPDFA KNHYVYVYYS PADTSVNRLS
RFKFENNVLD TASEKVILQL YSQRNICCHT GGSITFGPGG LLYLSTGDNS TPFDEPGQKY
VSNGYGPLDD RPGHLQYDGR RTSANSNDLR GKILRLKINE DGTYSIPDGN LFKQGTANTR
PEIYAMGTRN PYRISVDRKN GYVYWGEVGP DANDDKPDRG PRGYDEINQA KKPGNFGYPM
FVGNNYAYHL YDYETGKSGP AFDPAKPVNN SRNNTGIKDL PPAQPAFIWY PYAKSPDFPS
MGSGGRNAMA GPVYYNEFYP KETRFPDYYN NKLFIYDWVR GWIKAVTFDK DYNLSKTEDF
MPNTKFNAII DMEMGPDGRI YVLEYGNGWF SKNKDAGLAR IDYNGGNRAP LAEIHVDKLS
GGLPFKVKLS AKGSSDPDGD QLTYIWYLGN GNKKETKEPE TEATFATAGE YAVSVEVVDN
NGASTRSKGV ELYAGNETPQ VKVNVAGNTM FYFSGKPVAY NIAVNDKEDG STADGKIDVA
NLYVRAEYME GNDKAQAPQQ GHQIITGAIA GKNIMEASDC KTCHKPDEKS IGPSFKQVAE
KYKDDAKAPD YLANKIIQGG GGVWGETAMS AHPTLSQSEA HQLVEYIMSV GGGNKQAPSL
PVSGTIDPTT GKPEKDNGVL YLMASYTDKG GPGIKPITGT DAVSLRSPKI PAPSFDKSDA
VSTFEFDGKK LLIPTANGWV TYNGIDLTAV TGIDVIYFTQ EPLKYGYTVE IFLDKAEGVK
LGETLIGVGA KAKAPNTANI SFAPVADGKK HTLYVRLKSA DPAEKGNLGI TTFQLLSK
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