| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7270 |
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| Symbol | |
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| ID | 8363464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9085039 |
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| End bp | 9086835 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644969403 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126870 |
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| Protein GI | 256426217 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0568221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.664378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC AATTCTTGAA ATCAAAATAT ATAATCGTTG CAGCCGTAGT AGCCGGAGGG
CTGTTCTTCG ATGCGTGTAG CAAAAGTTTT CTGGAACGTG TTCCACAAGG CTCTCTCACG
GATACTGATG TGTCAACCAA AGCTGGTATA GGCGAATTGC TCATTGGCGC ATATGCCGCC
CTGGATGGTC AGCAGCAGGA TGTTGCTGCG ATTGGTGGCG GTGGCCCGTG GGAAGCTGCT
CCAAGCAACT GGATCTATGG GAGTGTTGCT GGTGGTGATG CACACAAGGG TAGTGATGCG
ACTGACCAGC CGCCTATCAG CCTTATCGCT ACCGGTCAGT TTGATGCCAG TAATGGTTTC
TTCAATACGA AGTGGAAAGT ATTGTTTGAT GGTGTGACTC GTACTAATGT GATTTTATCA
TTGTTGCCTA ATGTCACTGA TATGACGGCA TCCGAAAAAT CGCAGGTGGA AGCAGAAGCT
AAATTTCTGC GCGGTCACTA TTATTTTGAG CTGAAAAAAA TGTTTAATAA AGTGCCTTGG
GTGGATGAGA CGATGCTGGT GGATTATAAA CAACCAAATA ATACGGACAT CTGGCCAAAG
ATTGAAGCAG ATTTCCAGTT CGCTTATGAA ACACTGCCGC CTACACAGTC TCAGATAGGT
CGTGCAAATA AGTGGGCTGC GGGTACTTAT CTGGCGAAAA CCTATGTATA CCAGAAAAAA
TGGGCTAACG CCAAGACGCT TTTTGATCTG ATCACCACAC AGGGTGTTAC TGCTAAAGGC
GATCGTTATG CATTGACCAA CAGATTCGAA GACAACTTTG ATGCTGCTAC AAAAAACAAC
TCAGAGTCAG TTTTTGCTAT CCAGATGTCT GCCAACAATG GTTCTGGTCA GATCTCTAAC
GGTAACCAGG GTGAAATGCT GAACTTTCCT TACAACAGTC CATTCGGTTG TTGCGGATTT
TATCAGCCGA CACAGGACCT GGCTAATTCT TACCGTACAA ATGCAGAAGG ACTGCCATTC
CTGGATGATG CAAACGATCA TCCGCTGAAG AGCGATATGA AAGTACTCTC TACAGCACCA
TTTACGCCAG ATACAGCGCC GGTAGACCCT CGTCTGGACT GGACAGTAGG TCGTCGTGGT
ATTCCTTTCC TGGACTGGGG TAATCACCCT GGCCGTAGCT GGGTGCGTGA TCAGGACTAC
GCAGGTCCTT ATGCGCCTAA AAAGAATGTG TACTGGCAGT ATAACCAGGA TAAGTATAAA
GATCCTAACT CCTGGGCGCC TGGTTCTGCG ATCAACCTGG TGTTGATCCG TTATGCAGAT
GTGTTGTTGC TGGCAGCTGA AACAGAAGCT GAACTGGGCA ACCTGAATGC AGCGCAGACC
TATGTAAATC AGGTGCGTAC AAGAGCTGCA AACCCACAAA GTGCCGTGTA TAAATATACG
AATGACGCTA ATCCGATGGG CGGTTTCTCT ACTACACCAG CTGCAAACTA TGTGGTAGCT
AATTATCCGG CGGGCCGTTT TGCTGCACAA GGGCAAGCCT ATGCGTTGAA GGCCATCCGT
TTTGAACGTA AACTGGAACT GGCTATGGAA GGTCAGCGTT ACTTCGACAT CGTTCGCTGG
GGTACCGCGA ATGCAGAGAT GACTAAGTTC TTTGCATATG AATCCAAGAT CACGACTGAC
CTGGGAGGAG CTAAATTTGT AGCGCCACGT AATGAGTATT ATCCTGTTCC TCAGCGTCAG
ATTGACCTGA GTATGAAGGC TGGTGCGAAA ACACTGGAAC AGAATACCGG ATACTAA
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| Protein sequence | MKRQFLKSKY IIVAAVVAGG LFFDACSKSF LERVPQGSLT DTDVSTKAGI GELLIGAYAA
LDGQQQDVAA IGGGGPWEAA PSNWIYGSVA GGDAHKGSDA TDQPPISLIA TGQFDASNGF
FNTKWKVLFD GVTRTNVILS LLPNVTDMTA SEKSQVEAEA KFLRGHYYFE LKKMFNKVPW
VDETMLVDYK QPNNTDIWPK IEADFQFAYE TLPPTQSQIG RANKWAAGTY LAKTYVYQKK
WANAKTLFDL ITTQGVTAKG DRYALTNRFE DNFDAATKNN SESVFAIQMS ANNGSGQISN
GNQGEMLNFP YNSPFGCCGF YQPTQDLANS YRTNAEGLPF LDDANDHPLK SDMKVLSTAP
FTPDTAPVDP RLDWTVGRRG IPFLDWGNHP GRSWVRDQDY AGPYAPKKNV YWQYNQDKYK
DPNSWAPGSA INLVLIRYAD VLLLAAETEA ELGNLNAAQT YVNQVRTRAA NPQSAVYKYT
NDANPMGGFS TTPAANYVVA NYPAGRFAAQ GQAYALKAIR FERKLELAME GQRYFDIVRW
GTANAEMTKF FAYESKITTD LGGAKFVAPR NEYYPVPQRQ IDLSMKAGAK TLEQNTGY
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