| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7257 |
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| Symbol | |
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| ID | 8363451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9070967 |
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| End bp | 9073363 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969391 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003126858 |
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| Protein GI | 256426205 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.506744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.498638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACA GTTACCTGAA AACCGCCTTC CGGAATCTAA TGCGTAACAA ACGTCATTTC
CTGGTGAATA TCACTGGTCT GATGGTTGGT TTTGGCGCCT TTCTGCTTAT TTCTATCGTT
GTACAGTATG TAAAGGAGTA TGATAATTTT CATACGAAAA GAGACCGTAT TTATCGGATT
GTAAGGGCTG ATCTGAAAGG AAATGGTTTT GGTTCAGGCG CCCCGTTTCC CTTTGCGGCA
GGTTTGCGTA CGGATTATCC GCAGCTGGAA AAGGTAGCAG GCATTTATGG AGATAAAAAC
GTACAGGTCA CGATACCCGA AAAGGAGGGG GTAGCTGCGA AGAAATTCAG CGAGGCGGCA
GGCGTCTTTT TTGCAGAGCC TTCCTTTTTT GAAATGTTTG ATTTCAGGAT GCTTACAGGG
AATGCCGTCA GCGGTCTACA GGAGCAGAAT ACTGCATTGC TGTCAAGAGA TGTAGCTAAC
AGGTATTTCG GCGACTGGCG GCAGGCAACG GGTAAAATGA TCCGCGCATA TGGGCGATAT
ATCCGTATTA CGGGTGTAAT GGAAAATCCG CCTGACAACA CTGACTTTTC TTTAGGCATT
GTTATCTCCT ATGCTACTTT GCAGCCGTTG GGTTTGGGGA TGAATGACTG GGTGGGAATT
TCCAACAACT ACGTGCTGGT GCTTGCAAAG GAAGGTTATA CTGCCGGTCA GCTGAGTACT
TTACTACCTG GTTTTATTGC GAAACACATT CCGCCTTCAC ACGCAGGTTA TAAACTGTTA
TTACAGCCAT TAAAAGATAT ACACACTGAC AAACGTTTTG AAACTTTCAG CGGCCGTGTT
TTCAGTAAAG AACTCATCAC AGCTTTACAC CTGATAGGGA TATTTCTGCT GGTCATCGCC
TGTGTCAATT TTGTTAACTT GTCTACTGCG AATGCCATTA ACCGTGCACG CGAGGTAGGT
GTACGAAAAG TCCTGGGCAG TAACCGGCGA CAGCTGTTAT TACAGTTCCT GGGAGAGACC
GGTTTGTCCT GTTTTGTTGC TATGGCAGGC GCATTAATAC TGGCAATTGC GTTATTACCT
GCTTTGAGTG GATTACTGGA GATGAAGATC TCTCTGTCTG TATTGCCTGT TATACCAGCT
GTCTTATTTG TCCTGTTTTT ATGGGCCATT GTGACCTTAT TAGCCGGTTT TTACCCCGCA
TTGGTACTAT CAGGTTTTAA TCCGATGAAT GCGCTAAAAA GCCGTTTAAA TGCAGAAAAT
CCAAAAGGGA TTCATCTGCG GAGAGGACTG GTGATTTTCC AGTTTGTCAT TGCCCAGGTG
CTGATCATTG GTACCCTGAT CGTGATTGGA CAAACGAACT ATTTCCGTAA TGCGGATATG
GGCTTCAGCA GAGAGGCGAT CATTACGGCA GAATTTCCGC ATGATAGTAT CAGCCGTTCC
AGGTTTGATT ATCTGCGTGA CGGACTGATG CACCAGCCAG GTGTCAGCGA TGTTAGTTTC
AGCCTGTTTG CTCCTGCGGG AGAAGATTTC TGGGCGACGG ATTTTAAGTT GGGGGGCAAT
CATACGGATA AAGCAGATCT GATTGTGAAT ATGAAACCGG CAGATACCAA CTATTTCAAT
ATTTACAAAA TGCAGTTGCT GGCGGGAAGG TTGTATTATG ACGCCGATAC GGTCAGAGAA
TTTGTCGTGA ATGAAACCTT AGTAAAGAAA GCAGGTTTTG CCAGTCCGGA AGCGGCTATC
GGACAATCCA TTACAGTGAT GAACAAGACC TTGCCTATTG TGGGTGTCGT AAAGGATTTT
CATGTGAAGT CTTTACGTGA TCCGATTGAC CCTGTTGTGA TGACAACGGT AAAGCGGATT
TACAAAACGG CCAATATCAG GATTGAAACC GGTAAGGCGA GGGTAACCCT TGCCGCTATT
GAAGCCTTGT GGAATAAGTA TTTTCCCGAT TACATTTTTA AATACAGTTT TATAGACCAG
ACGCTGGCAG ATTATTACAA ACAGGAAAAC CAGCTGGCAC AATTGTTTAA GATCTTTGCA
GGCATTGCTA TTTTCATTTC CTGTCTTGGC TTATATGGGT TGATTTCTTT CATGGCCTTA
CGACGTAAGA AAGAAATAGG CATCCGGAAG GTGTTAGGTG CAGACGTGAT CACCATTGTG
ATGCTGATGT CAAGAGAGTT CACAATATTG ATTGCACTGG CCTTTGCGAT TGCTACGCCG
CTTGGGTGGT ATTTTATGAA TGACTGGTTG CAGCAGTTCA GTTTCCGGAT GGAGATAGGG
GCGGGTGTTT TTGTGACTAC GTTATTATTC TCATTGCTGA TTGCGTGGCT GACGGTAGGG
CATTCTGCCA TAAAGGCTGC ATTAGCTGAT CCGGTGAAGA GTTTGCGAAC GGAATAA
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| Protein sequence | MLHSYLKTAF RNLMRNKRHF LVNITGLMVG FGAFLLISIV VQYVKEYDNF HTKRDRIYRI
VRADLKGNGF GSGAPFPFAA GLRTDYPQLE KVAGIYGDKN VQVTIPEKEG VAAKKFSEAA
GVFFAEPSFF EMFDFRMLTG NAVSGLQEQN TALLSRDVAN RYFGDWRQAT GKMIRAYGRY
IRITGVMENP PDNTDFSLGI VISYATLQPL GLGMNDWVGI SNNYVLVLAK EGYTAGQLST
LLPGFIAKHI PPSHAGYKLL LQPLKDIHTD KRFETFSGRV FSKELITALH LIGIFLLVIA
CVNFVNLSTA NAINRAREVG VRKVLGSNRR QLLLQFLGET GLSCFVAMAG ALILAIALLP
ALSGLLEMKI SLSVLPVIPA VLFVLFLWAI VTLLAGFYPA LVLSGFNPMN ALKSRLNAEN
PKGIHLRRGL VIFQFVIAQV LIIGTLIVIG QTNYFRNADM GFSREAIITA EFPHDSISRS
RFDYLRDGLM HQPGVSDVSF SLFAPAGEDF WATDFKLGGN HTDKADLIVN MKPADTNYFN
IYKMQLLAGR LYYDADTVRE FVVNETLVKK AGFASPEAAI GQSITVMNKT LPIVGVVKDF
HVKSLRDPID PVVMTTVKRI YKTANIRIET GKARVTLAAI EALWNKYFPD YIFKYSFIDQ
TLADYYKQEN QLAQLFKIFA GIAIFISCLG LYGLISFMAL RRKKEIGIRK VLGADVITIV
MLMSREFTIL IALAFAIATP LGWYFMNDWL QQFSFRMEIG AGVFVTTLLF SLLIAWLTVG
HSAIKAALAD PVKSLRTE
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