| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7252 |
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| Symbol | |
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| ID | 8363446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9061736 |
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| End bp | 9063349 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969386 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126853 |
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| Protein GI | 256426200 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.298373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.555692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TATGCTGGTA CCTGTTTGTA TGCGCGTGCA TTGTAACAGG ATGCAATAAA
ATGCTGGATG AAGATGTGGT ATCTTCTGTG ACAGATGATT TCTATAATAC CCCCGGAGGA
TTTACGACCG CGGTAAATGG TAGTTATGCT GCGCTGCGTA GTTTTTATAG TACAGAGAGA
GGTATGACGG TAACGGTATT TGGTACGGAT ACTTATACCA ATGGTTCAGA TGGTGATTTC
AAATTTACGA ACCAATACAC GTCGCAACTC GATGGTCGTT ATGCGCACCT GAGAGAAATA
TGGAATGCTT TTTATCAGTC TATCAATACG GCGAATGCGG TGGTTAGCAG AGCAGACCAG
GTGCCGGAGC TGGACAGTGT AGCCAAACGT TCGGGTATAG CGCAGGCGCG TTTTTGTCGT
GCGAATTATT ATTTCATATT ACTGCAGATG TTCGGGGCGG TACCCTTACG GCTGACAGAA
AATACACAGA TCGTTACAGA AGCGCATCGT GATCCTGTTC CGGATATTTA CAATGCAATT
ATTGCAGATC TGAATTATGC TGCACAGTCA TTACCGGTTA CACAATCAGA ATGGGGACGT
GCTACAAAAC CAGCGGCTGA ACATCTGCTG GCGAGAGTAT ACCTGACACG CGCTACTTCC
GAAGCAAAAG GAACACATGA TTATGACAGC GCAGCGGTGT ATGCAACAAA AGTGATCAAC
AGTTATGGAT TGTCATTGTT GCCGGATGTC GGACAGGTAT GGGCACAGGG TAAAGAGAAC
AATGCAGAAA CCATCTGGGC CGTACAATAC ACGAATGATG CGCTGTATAA TTCAGGCGAT
AACAATGCCT GCCGTTTTTT CCTGATGCAG TATGATGTAC TGGGAGGTAT GAAACGCGAT
CTGGCGAATG GTACACCATG GAAGCGTTTC CGTCCTACAA AATTCCTGTT GGACACACTG
TATGCCGACA GGGTGAATGA TGCCCGTTAT AATAAGTTTT ACACAGTTGT ATGGTTTGCC
AATGCAGGTA GTGCCAAGCT GAAAGTGGGC GATACTTCTG TATACATGCC AGGACAGGAT
GTATCTGATG CGGTGATCGC CAGCAAGAAT TATCAGCTGG TACCTCCACG CAATTATACA
GAGAGACTAT ATCCTTCACT GAATAAGTTT GCCGATGCAT TGCGTCCGGA TAACCAGGCT
TCAGGCGTAC GTCCGTTTAT TGCGTTCCGG CTGGCGGAAG ATTACCTGAT TGCAGCAGAA
GCCTACATGT ATAAAAATGA AAAAGGAACA GCGGTCACTT ACCTGAATAC ATTACGTATG
CGTTCGGCAG CTGTCGGTGC TACAGATGAG GAGACCAATG CACATAAAGA GGCCATGAAG
ATTACGGAAG CGCAATTAGA CATCGATTTC ATTCTGGATG AACGCGGCCG TGAACTGGTG
GGAGAGCAGT TGCAATGGTT TGATCTGAAG CGTACCAACA AACTGCTGGA ACGTGTGCGA
TTGCACAATC CGCAGGGCGG ACCGAATATC GAAACCAAAC ATTTACTGCG TCCTATTCCG
CAGGATCAGA TTGACAGAAC TAGCAATGAG TTTCCGCAGA ATCCAGGTTA TTGA
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| Protein sequence | MKNICWYLFV CACIVTGCNK MLDEDVVSSV TDDFYNTPGG FTTAVNGSYA ALRSFYSTER
GMTVTVFGTD TYTNGSDGDF KFTNQYTSQL DGRYAHLREI WNAFYQSINT ANAVVSRADQ
VPELDSVAKR SGIAQARFCR ANYYFILLQM FGAVPLRLTE NTQIVTEAHR DPVPDIYNAI
IADLNYAAQS LPVTQSEWGR ATKPAAEHLL ARVYLTRATS EAKGTHDYDS AAVYATKVIN
SYGLSLLPDV GQVWAQGKEN NAETIWAVQY TNDALYNSGD NNACRFFLMQ YDVLGGMKRD
LANGTPWKRF RPTKFLLDTL YADRVNDARY NKFYTVVWFA NAGSAKLKVG DTSVYMPGQD
VSDAVIASKN YQLVPPRNYT ERLYPSLNKF ADALRPDNQA SGVRPFIAFR LAEDYLIAAE
AYMYKNEKGT AVTYLNTLRM RSAAVGATDE ETNAHKEAMK ITEAQLDIDF ILDERGRELV
GEQLQWFDLK RTNKLLERVR LHNPQGGPNI ETKHLLRPIP QDQIDRTSNE FPQNPGY
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