| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7243 |
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| Symbol | |
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| ID | 8363437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 9052497 |
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| End bp | 9054062 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644969377 |
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| Product | phosphodiesterase |
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| Protein accession | YP_003126844 |
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| Protein GI | 256426191 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTA CTTTAATATC GACAATAGCT GCAGTAGTGG CATTGATCAT AGGTATTTTA
TTAGGTAAGG TGATATTTGC CAAAAACACA CAGCATAAAA TCCAGGAGGC TGAATTACAG
GCACAGAAAA TAGTAGCCGA AGGACAACTT ACTGCAGAGA ACCTGAAGAA AGACAGATTG
CTGGAAGCAA AAGAAAAATT CCTTCAGCTG AAAAGTGAGC ACGAAAAAGA GGTATTACAA
CGTAACCAGA AAATAGCTGA CTCAGAAAAC CGGATCAAAC AGAAAGAACA ATCCCTGAAT
CAGAAGACTG AAAATATCCA GAAACAGACA CAGGAGAACG AGGCGATCAA GGAAAACCTG
ACCCGCCAGA TGGAACTGGT TGCTGTAAAA CGTACTGAAC TGGAAAAACA CCAGGAAGAA
CACATCCGCC GCCTGGAGAA GGTAGCTGCC CTGACTGCTG AAGAAGCCCG TCACCAGCTG
ATCGAAAGCC TGAAAGAAGA AGCCCGCTCT CAAGCGCTCG CACACATCCA GGAAATCATT
GAGGATGCTA AACTGAAAGC AAACAAAGAA GCTAAAAAGA TCATCATACA GTCCATCCAG
CGTACTGCTG CTGAACAGAC CATCGAGAAC GCAATCACCG TGTTCAACCT GGAAAGTGAT
GAAATCAAAG GTCAGATCAT CGGTCGTGAA GGACGTAACA TCCGCGCTAT CGAAGCTGCT
ACCGGTGTTG ACCTGATTGT AGACGATACC CCTGAAGCAA TCGTACTCTC TTCCTTCGAC
CCATTACGTC GCGAGATTGC CCGCCTGTCC CTGCAACGTC TGGTACAGGA TGGCCGTATC
CACCCTGCAC GTATCGAAGA AGTAGTTGAA AAAACAAAGA AACAACTGGA AGAACAGGTA
ATGGATATCG GTGAAAGAAC CGTTATCGAA CTGGGCATCC ACGGTCTGCA TAAAGAACTG
ATCCGCCTGG TAGGTAAAAT GCGTTTCCGC TCCTCCTACG GTCAGAACCT GCTGATGCAC
TCCAAAGAAA CAGCTAACCT TTGTGCTGTA ATGGCAGCTG AACTGGGTCT GAACCCTAAA
CTGGCAAAAC GTGCCGGTCT GCTGCATGAC ATTGGTAAAG TGCCTGACGA AGAAACTGAA
CTGAGCCACG CCCTCCTCGG CGCCAAACTG GCTGAGAAAT ATGGCGAGCA CGCTGCTGTA
GTAAACGCTA TCGGCGCTCA CCACGATGAA ATGGAAATGC AATACGTTAT CTCTCCGATC
ATACAGGCTT GTGACGCCAT CAGCGGTGCT CGTCCAGGTG CTCGTCGTGA GATTATGCAG
AGCTATCTGC AACGTATCAA AGACCTGGAA AACCTGGCAA TCGCCCATGA CGGCGTAGAA
AAAGCTTATG CTATCCAGGC AGGTCGCGAA CTGCGTGTCA TTGTTGAAAG TGATAAAGTA
ACGGACAATG ATGCTGACCG TCTGTCTTTC GAGATCGCTA ACAAGATCCA GACAGAAATG
CAATATCCTG GTCAGATCAA AGTAACTGTG ATCCGCGAAA AACGTTCCGT AAACGTAGCC
CGCTAA
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| Protein sequence | MEVTLISTIA AVVALIIGIL LGKVIFAKNT QHKIQEAELQ AQKIVAEGQL TAENLKKDRL
LEAKEKFLQL KSEHEKEVLQ RNQKIADSEN RIKQKEQSLN QKTENIQKQT QENEAIKENL
TRQMELVAVK RTELEKHQEE HIRRLEKVAA LTAEEARHQL IESLKEEARS QALAHIQEII
EDAKLKANKE AKKIIIQSIQ RTAAEQTIEN AITVFNLESD EIKGQIIGRE GRNIRAIEAA
TGVDLIVDDT PEAIVLSSFD PLRREIARLS LQRLVQDGRI HPARIEEVVE KTKKQLEEQV
MDIGERTVIE LGIHGLHKEL IRLVGKMRFR SSYGQNLLMH SKETANLCAV MAAELGLNPK
LAKRAGLLHD IGKVPDEETE LSHALLGAKL AEKYGEHAAV VNAIGAHHDE MEMQYVISPI
IQACDAISGA RPGARREIMQ SYLQRIKDLE NLAIAHDGVE KAYAIQAGRE LRVIVESDKV
TDNDADRLSF EIANKIQTEM QYPGQIKVTV IREKRSVNVA R
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