Gene Cpin_7239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7239 
Symbol 
ID8363433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9046573 
End bp9048147 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content51% 
IMG OID644969373 
Productreplicative DNA helicase 
Protein accessionYP_003126840 
Protein GI256426187 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.167922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA ATCTTAAGAA GGACCGCAAC GTACGGCGCA AACCGTCCGT TGACGTATCT 
ACCATGATGT ACGGCAAGAT TCCTCCTCAG GCAAAGGAGA TGGAAGAGGC CGTATTGGGA
GCCATTATGT TGGAAAAAGG CGCTTTTGAC ACGGTAGTAG AGATATTGAA AGGTGAATGT
TTTTACGTAG AAGCACATCA GAAGATATTT ACAGCGATGA CCCGCCTGGC TGGTAAATCC
ATGCCGGTGG ATATCCTGAC TGTAGTGGAA GAATTGCGTT CCATGGGTGA GCTGGAAGTA
GTGGGAGGTC CTTATTATAT TACCAGGTTA ACCAACATGG TGGTTTCATC CGCCAATATA
GAGGCGCATG CCCGTATCAT CCTGCAAAAG TTTATCCAGC GTGAACTGAT CCGTATCTCC
GGTGAGATTC TGAGTGAATC TTACGAGGAT ACGGCCGACG TGTTTGATCT CCTGGACTCT
GCTGAAAGCA AGCTGTTTGA GGTAACCAAC AATCACCTGC GCAAGAACTA CGACAGTATC
GACCGCGTAT TGGTGAATAC CATGAAACGT ATCGAAGACC TCCGTAACAG GGGAGACGAT
ATCACAGGGG TACCTTCCGG TTTCCCTTCA CTTGATAAAG TGACGTATGG CTGGCAGTCG
ACGGATCTTA TCATCATCGC GGCACGTCCG GCGGTGGGTA AGACCGCTTT CGCACTGAAC
CTGGCCAGAA ACGCAGCGCT GCATCCCCGA TTCCCGAAAG GAGCCGCGGT GTTCTCGCTT
GAGATGTCCT CCGGACAGAT CGTACAGCGT ATCCTGTCCG CAGAGTCGGA AATAAAACTG
GAAAAGATCA CCAGGGGTAA ACTGGAAGAG TATGAGATGA AGAAGCTGAT GACCCATGGT
ATCGAACGCC TGGCGAAAGC ACCCATCTTC ATCGATGATA CCCCGGCCCT CAACATCTTC
GAGCTCCGTG CAAAGGCAAG AAGGCTGGTA CACAACCATG GCGTAGGCGT AATTATCATC
GACTACCTGC AGCTGATGAG TGGTAGTGCA GATGGTAAGG GGACCAACCG TGAGCAGGAG
ATCAGTAAGA TCTCGCGTGA CCTGAAAGGA CTCGCGAAAG AGTTACAGGT ACCGATCCTT
GCATTGTCGC AGTTGAGCCG TGATGTGGAA AAACGTAAAG ACGGTAACAA GATGCCGCAG
CTGAGTGACC TCCGTGAATC TGGTGCGATC GAGCAGGATG CCGACATGGT AATGTTCCTG
TACCGCCCTG AATACTACGA GATCAACACG AACGAAATGG GCGAGTCTAA TAAAGGTGAG
ACCCACGTTC GTATCGCGAA ACACCGTAAC GGTCAGCTCG ACACGATCAA ACTACGCGCA
ATCCTGGAAT TCCAGCGCTT CGAAGATGAT GGTAGTCTGG AAAACCCGGG TGGAGGCAGC
AGCAACGCAT TTGCCGGTAT GCGTAACCAT GACGCAGGTG GTGGTGGCAA CGATGAAGCG
AAGCTGTATA TCCAGAAGGG TTCCCGTATG AACGACATGA ACTTCGACGA AGGTTTTGAA
GACGCTCCTT TTTAG
 
Protein sequence
MDLNLKKDRN VRRKPSVDVS TMMYGKIPPQ AKEMEEAVLG AIMLEKGAFD TVVEILKGEC 
FYVEAHQKIF TAMTRLAGKS MPVDILTVVE ELRSMGELEV VGGPYYITRL TNMVVSSANI
EAHARIILQK FIQRELIRIS GEILSESYED TADVFDLLDS AESKLFEVTN NHLRKNYDSI
DRVLVNTMKR IEDLRNRGDD ITGVPSGFPS LDKVTYGWQS TDLIIIAARP AVGKTAFALN
LARNAALHPR FPKGAAVFSL EMSSGQIVQR ILSAESEIKL EKITRGKLEE YEMKKLMTHG
IERLAKAPIF IDDTPALNIF ELRAKARRLV HNHGVGVIII DYLQLMSGSA DGKGTNREQE
ISKISRDLKG LAKELQVPIL ALSQLSRDVE KRKDGNKMPQ LSDLRESGAI EQDADMVMFL
YRPEYYEINT NEMGESNKGE THVRIAKHRN GQLDTIKLRA ILEFQRFEDD GSLENPGGGS
SNAFAGMRNH DAGGGGNDEA KLYIQKGSRM NDMNFDEGFE DAPF