Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7236 |
Symbol | |
ID | 8363430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 9043642 |
End bp | 9044169 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644969370 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003126837 |
Protein GI | 256426184 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGA CTGACTCGGT AGACGCTTTT AACGAAGTGT ACAACCGTTA TTGGGACATA CTGTATCATA TTACCTTGAA ACGGCTGCAG GTGAAGGAAG TTGCTGAGGA GATCGTGCAG GACACCTTCA TCATCCTTTG GGAAAAAAGG CATGATATCG AGATCTCCGT ACTGAAACAT TACCTTTTTG CCATCACCCG TTACGCCGTA TTTCATTATC TCGCAAAGCA ACAGACGATT GCTGCCCGTA TGAAAGCCCT GTCACATACG CCACAGTTGG CAGGTGGAAA TGCAGATCTG GAAAACCTTG TCAGTGACCG TTTATTATTA CAGCTGATCG AAACCATCTC AAATGAATTG CCGGAGAAAA GCAGGCAGGT GTTCCGGTAT AATAAATTGC TGGATCACTC TTTATTACAG GCAGCAAAAA CTTTTGATAT ATCTCCCAAA ACAGCAGAAG GACATCTCAC GAAAGCCCTG AAGACGCTAC GGGTGAAATT AAGTGCATTG TATAGTACCG TTCTCTGA
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Protein sequence | MIRTDSVDAF NEVYNRYWDI LYHITLKRLQ VKEVAEEIVQ DTFIILWEKR HDIEISVLKH YLFAITRYAV FHYLAKQQTI AARMKALSHT PQLAGGNADL ENLVSDRLLL QLIETISNEL PEKSRQVFRY NKLLDHSLLQ AAKTFDISPK TAEGHLTKAL KTLRVKLSAL YSTVL
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