Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7235 |
Symbol | |
ID | 8363429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 9042555 |
End bp | 9043391 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644969369 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003126836 |
Protein GI | 256426183 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACG AATACATTCG TTCTCTTGCA CGTAAGTGGC TGGCCGGTAC TGCAACTGAA GAAGAAACCG CAGCCCTGAT GCAATGGTAT GGGAAAGAGG AGGAAAAGAA GCAAAAATCT GTCTGGTGGA TAGGTATAGC CGCCACAGTA CTGTTGACAG CCGGCGTCTG GTGGATGATG AAAAAACCGG AAGGGCGGAA GATGGCAGTA TATGTGCCAC GTGAACAACA GAACAGGGTC GTATTACCTG ACAGCTCTGT AGTATGGCTG AATGCGGACA GTAAACTACA GTACCGGGAA GATACACTTT CGCGGGAGGT AACACTGACC GGGGAAGGAT TCTTCGATGT CAGCAAAAGG ACCAAACCAT TTGTGGTAAA AGCCGGCAGA TGTATTACCA CCGTACTGGG TACCTCTTTT AATATCAAAG CATATAACAA TGAAGCAGTC GCCATTACGG TAGCTTCCGG AAAGATCCAG GTACAGGATG AAAAAAAACA TATCAGCATA TTAACAGCCA ACAAGCAGAT CACGCTGGAA AAGACGACAG TTGAACGAAC AGTGAACGCT ACGGTTGCTC ACGCCTGGAT CCACGGCAGG TTTGAGATAG ATAATGAAAC ATTTGAAACA GTGGCGAATA ACCTGAGTAG AAAATATGGA GTCACCTTTC ACTTTGAAAA TGACGCCTTA CGCCAATGTA CTTTTATCGC CAGTTTTGAT GAACATGCCA CATTGGAAAG AATACTCGGA CTATTATGTA AGATCAACAA TTCCACATTC CGCATCAGCG AAGATCAGCA GGAAGTGTAT ATCAGCGGAC AAGGTTGCAG TCTATAA
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Protein sequence | MSDEYIRSLA RKWLAGTATE EETAALMQWY GKEEEKKQKS VWWIGIAATV LLTAGVWWMM KKPEGRKMAV YVPREQQNRV VLPDSSVVWL NADSKLQYRE DTLSREVTLT GEGFFDVSKR TKPFVVKAGR CITTVLGTSF NIKAYNNEAV AITVASGKIQ VQDEKKHISI LTANKQITLE KTTVERTVNA TVAHAWIHGR FEIDNETFET VANNLSRKYG VTFHFENDAL RQCTFIASFD EHATLERILG LLCKINNSTF RISEDQQEVY ISGQGCSL
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