Gene Cpin_7231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7231 
Symbol 
ID8363425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9034835 
End bp9035284 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID644969365 
Productprotein of unknown function DUF1486 
Protein accessionYP_003126832 
Protein GI256426179 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.390995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAC CAGATATACA GGCAGCACCA CTGAGTGCTG AAGAAATAAC AGCTATAAAA 
GTATTTTACG GCGCCTGGAA AGAACAACAA CCGGATTTAC TGGATACCGT CTGCACACCG
GACTGGCAGG ATATCCCGCT GGCTCCCGGA CAGGCACACG GTCCACAGGG CTTGAAAGAT
ATCATCCGCA GCTTTGTCGG CAGCTTTCCT GATATAGAGA TCGTCATTCA TGAAATCATG
GGTGTACACG AACGGGCGGC AGTAAGAGCA GCGATTACTT TCACACACGA TAAAGCGGTA
TTAGGTATTC CACCAACCAA CAAGAAAGTG AGCATTCCCT TACATGAATT CCATTACCTG
AAAGATGGTA AACTCACACA TACCTGGCAT ATGGAAGACT GGTTCGGCTT ACTTGTACAG
AGCGGCGCAT GGACTGCGGA AGGGCTGTAG
 
Protein sequence
MKTPDIQAAP LSAEEITAIK VFYGAWKEQQ PDLLDTVCTP DWQDIPLAPG QAHGPQGLKD 
IIRSFVGSFP DIEIVIHEIM GVHERAAVRA AITFTHDKAV LGIPPTNKKV SIPLHEFHYL
KDGKLTHTWH MEDWFGLLVQ SGAWTAEGL