| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7229 |
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| Symbol | |
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| ID | 8363423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9032981 |
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| End bp | 9033496 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644969363 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003126830 |
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| Protein GI | 256426177 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACC GCCAAACATT TGAAGATATC TTTAGAGAAC ATCACGCCGC CTGTCTCGCT
TTTGCCGTGC ATTACACTGG TAATGTCCAC GAGGCGGAGG AGGTAGTGCA GCAGGTATTC
CTGCGACTGT GGGAGAAAAG AGCGGTGATT GATATCACAG GGGCGACCCG GTCTTACCTG
CTGGCGGCGA TCCGGAATAC GGCAATCAGT AACTGGCGGA AAGAGACGGT GAGGCAGGAG
AAAGAGCAGA CCGCCGGTCA TCTCCAGGCA GCAGATGTAC CCGTTCAATC GCCGGTATGG
GAGTTGGAAA AACGGTATCA ACAAGCCCTG GAAGTACTCC CTGAGCGTTG TCGTGAAGTG
TTTATACTCA GCCGTCAGCA GCAATTGAAG TACCATGAGA TCGCGGAAGT AATGAACATT
TCTGTTAAGA CGGTGGAAAA CCAGATGGGA AAAGCATTGA AAATTATGCA CCGGGAACTG
AGGGACTACC TGAACCTGTT GCTGCTGCTA CTTTAA
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| Protein sequence | MLDRQTFEDI FREHHAACLA FAVHYTGNVH EAEEVVQQVF LRLWEKRAVI DITGATRSYL
LAAIRNTAIS NWRKETVRQE KEQTAGHLQA ADVPVQSPVW ELEKRYQQAL EVLPERCREV
FILSRQQQLK YHEIAEVMNI SVKTVENQMG KALKIMHREL RDYLNLLLLL L
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