Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7227 |
Symbol | |
ID | 8363421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 9029217 |
End bp | 9031844 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644969361 |
Product | TonB-dependent receptor plug |
Protein accession | YP_003126828 |
Protein GI | 256426175 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGT TTGGTAGATT CCTGCTGGGG ATGCTATTGA TCAGTATTTC TGTACAGGCG TCAGAGTGGG ACTGGAGAAT GAAAATCAGC GTGGTCGTAA AGGACCAGCC GCTGGAAACG GTATGTACTA TACTCGAACA ACAATACGGT ATCCATTTTT CTTATAGCCG CAATATTGTG GACCTCTCAC CGCTGGTGAC CATCAATGTG CAGAACCGGC CCCTGAAAAA AGCCCTGGAT GAAATTTTTA GCCCTTATAA TATTTCCTTT GCCCGCATAG GCGATCAGAT TGTGTTGACA GTCAAGAAGC ATCCAACGGC TACTATTAAT GGATATGTAC AGGATTTTAA GACTGGTGAG AAGTTGATCG GGGCCACTGT TTATTCTCCC ATATTGCATG TAGGGACGAT GACCAACCAA TTTGGCTTTT TCAGTATTAC CCTTCCACAG GATACGAGTA GTCTGACGGT ATCTTATATC GGCTATGAGC CTGCTCATCT TTATTCCGGG AAAAATGACA AGACACCGGT AATTGTGGCA TTGCATCCAA AAAGTAGCTT GCCTGAAGTG ATTGTAGATA CAATTCGTCC GACGGAGCAA AGTACTGTCA GCCGCCTGAA TGTATCTCCG GCAGCTGTTA AATCCATGCC CCGTTTATTG GGTGAAGCAG ATATGATGCG TACGATTGTT GCCTTACCTG GTGTGTCCGG TAGCCTGGAT GGTGCAGGTT CTCTGAATGT CAGGGGAGGT AGCCCTGATC AGAACCTGAT ACTGCTGGAT GGTACTCCTA TATTTAACGT TTCGCATCTG TTTGGTATTT TCTCGGTGTT CAACCCTGAT ATTGTGAAAA ACGCAGACTT CTATAAAGGT GCATTTCCTG CCCGTTATGG TGGTCGTTTG TCTTCCATTG TGGATATCTC TCTTAAAGAC GGAGATATGC AGCAGTATCA TGGAGAGGCA GCTATAGGAT TGATTGCGGC GAAAGCAATG GTAGAAGGGC CACTGAAAAA GGACAAAACA TCTTTTCTTG TGTCAGCCCG CCGTTCACAT ACAGATATGC TGATGAATGA CCTGATTGTG AATAATAACA CGGAGTCCGG ACCGGAAAGT AATGCATATG TGTATTTCTA TGATGCCAAT GTGAAGATCA ACCATATTTT TTCACCCCGT GACCGTATCT ATCTAAGTGC ATATATAGGG CAGGACAAAC TCAGTGTGAA ATGGAAGGAG GGGTCTTCGG ACGGCGGCAT CAGTACTTAT TCCGGCGATA GCCGTTCTAA TTTCCTCTGG GGAAATTATA CCAGTACTTT ACGATGGAAT CATGTGTTTG GGCCGAAGAT GTTTGCAAAT GTGACGGTGA ATTATTCACA ATATTATTTC TCCACTGATT ATAAATACAA CTACAAGCCG CTGAATTCAT TGGATACAGG TATATTATCC GGTAAATACT ATTCCCGGAT ACAGAATGCC GTGGCCAAGA TGGACTTTGA ATACAGGCCA CAGCCCAAAC ACACGATTAA ATTTGGTGTC GGTGGCATCA CACATATTTT CACACCAGGT GTATCTGTAT TTCAGGACAA TGGTAAAGAT CAGCCGGCAG TGGATACCAC TTATGGCGAT GTGACTTCGG TAGGACAGGA GTTGTATCTG TATGGTGAAG ATGAATGGAA TGCGGCACAT AATCTCTGGC TGAATCTGGG GGTACATGCA TCCGGTTTCC TGGTGGATGG TCGTTTCTAT AATTCCATAC AACCCCGTTT AGGTATCCGT TATGAATTGC CGCGCAGATG GGTGCTCAGA GGTTCGTATA CACATATGAC GCAGTATCTG CATCTGCTGG CTAATAATGC GGCGAGTCTG CCTACAGATC TGTGGGTTCC ATCATCCGGA AGGGTAAAGC CAATGTTCTC ACGGCAGGGT TCTTTTGGTG TATCCAAAAC GAGCAGAAGA GGGATGTATG CGATGTCACT TGAGGGCTAT TACAAGACCA TGGACCATGT GATAGAGTAT AAAGGGGCAG CTTCTCCATT TAACGGAGCA GGAAAGGATT GGGATGAAGT GGTGGATATT GGTAAGGGGC GTAGTTATGG TGCAGAATTA TTACTTGAGA AAAAGAAAGG AACAACACGC GGCTGGATAG GCTATACCTT GGCATGGTCA GAAAGAGCTT TCCCCAGTGT TAATCAGGGA AGAATATTCC CTTATAAATA TGACCGCCGG CATGACCTGG AAGTGGTGAT CACGCAAAAG CTGGGTAAAC GCTGGGAATT GTCCGCCAGT TGGGAATATG CTTCCGGTAC GCCTTTGTCA TTACCCAATG CCAGTTATGA AGGGATTAAT GATCCTTCTC CTTATGATCC GCCACAGAAC GATCCTATAC TGGATCATAT GGGCGACAGG AATAAGTACC GTACTACACC GATGCACCGG CTGGATCTCA GCGCCACTTA CAGCAAAAAG AAGCGGCTGT GGACAAAAAG CTGGACGTTC AGTCTGTACA ATGCCTATAA TCAACAAAAT CCATTCTTTT ACGCCATCGT CACTGACAGG GAGAAACAGG AGCGTTATCT GGCCGAGGTC AGCATCCTGC CTATTCTGCC TAGTGTGACG TACGCTATTA AATTTTAA
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Protein sequence | MSLFGRFLLG MLLISISVQA SEWDWRMKIS VVVKDQPLET VCTILEQQYG IHFSYSRNIV DLSPLVTINV QNRPLKKALD EIFSPYNISF ARIGDQIVLT VKKHPTATIN GYVQDFKTGE KLIGATVYSP ILHVGTMTNQ FGFFSITLPQ DTSSLTVSYI GYEPAHLYSG KNDKTPVIVA LHPKSSLPEV IVDTIRPTEQ STVSRLNVSP AAVKSMPRLL GEADMMRTIV ALPGVSGSLD GAGSLNVRGG SPDQNLILLD GTPIFNVSHL FGIFSVFNPD IVKNADFYKG AFPARYGGRL SSIVDISLKD GDMQQYHGEA AIGLIAAKAM VEGPLKKDKT SFLVSARRSH TDMLMNDLIV NNNTESGPES NAYVYFYDAN VKINHIFSPR DRIYLSAYIG QDKLSVKWKE GSSDGGISTY SGDSRSNFLW GNYTSTLRWN HVFGPKMFAN VTVNYSQYYF STDYKYNYKP LNSLDTGILS GKYYSRIQNA VAKMDFEYRP QPKHTIKFGV GGITHIFTPG VSVFQDNGKD QPAVDTTYGD VTSVGQELYL YGEDEWNAAH NLWLNLGVHA SGFLVDGRFY NSIQPRLGIR YELPRRWVLR GSYTHMTQYL HLLANNAASL PTDLWVPSSG RVKPMFSRQG SFGVSKTSRR GMYAMSLEGY YKTMDHVIEY KGAASPFNGA GKDWDEVVDI GKGRSYGAEL LLEKKKGTTR GWIGYTLAWS ERAFPSVNQG RIFPYKYDRR HDLEVVITQK LGKRWELSAS WEYASGTPLS LPNASYEGIN DPSPYDPPQN DPILDHMGDR NKYRTTPMHR LDLSATYSKK KRLWTKSWTF SLYNAYNQQN PFFYAIVTDR EKQERYLAEV SILPILPSVT YAIKF
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