Gene Cpin_7227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7227 
Symbol 
ID8363421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9029217 
End bp9031844 
Gene Length2628 bp 
Protein Length875 aa 
Translation table11 
GC content45% 
IMG OID644969361 
ProductTonB-dependent receptor plug 
Protein accessionYP_003126828 
Protein GI256426175 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGT TTGGTAGATT CCTGCTGGGG ATGCTATTGA TCAGTATTTC TGTACAGGCG 
TCAGAGTGGG ACTGGAGAAT GAAAATCAGC GTGGTCGTAA AGGACCAGCC GCTGGAAACG
GTATGTACTA TACTCGAACA ACAATACGGT ATCCATTTTT CTTATAGCCG CAATATTGTG
GACCTCTCAC CGCTGGTGAC CATCAATGTG CAGAACCGGC CCCTGAAAAA AGCCCTGGAT
GAAATTTTTA GCCCTTATAA TATTTCCTTT GCCCGCATAG GCGATCAGAT TGTGTTGACA
GTCAAGAAGC ATCCAACGGC TACTATTAAT GGATATGTAC AGGATTTTAA GACTGGTGAG
AAGTTGATCG GGGCCACTGT TTATTCTCCC ATATTGCATG TAGGGACGAT GACCAACCAA
TTTGGCTTTT TCAGTATTAC CCTTCCACAG GATACGAGTA GTCTGACGGT ATCTTATATC
GGCTATGAGC CTGCTCATCT TTATTCCGGG AAAAATGACA AGACACCGGT AATTGTGGCA
TTGCATCCAA AAAGTAGCTT GCCTGAAGTG ATTGTAGATA CAATTCGTCC GACGGAGCAA
AGTACTGTCA GCCGCCTGAA TGTATCTCCG GCAGCTGTTA AATCCATGCC CCGTTTATTG
GGTGAAGCAG ATATGATGCG TACGATTGTT GCCTTACCTG GTGTGTCCGG TAGCCTGGAT
GGTGCAGGTT CTCTGAATGT CAGGGGAGGT AGCCCTGATC AGAACCTGAT ACTGCTGGAT
GGTACTCCTA TATTTAACGT TTCGCATCTG TTTGGTATTT TCTCGGTGTT CAACCCTGAT
ATTGTGAAAA ACGCAGACTT CTATAAAGGT GCATTTCCTG CCCGTTATGG TGGTCGTTTG
TCTTCCATTG TGGATATCTC TCTTAAAGAC GGAGATATGC AGCAGTATCA TGGAGAGGCA
GCTATAGGAT TGATTGCGGC GAAAGCAATG GTAGAAGGGC CACTGAAAAA GGACAAAACA
TCTTTTCTTG TGTCAGCCCG CCGTTCACAT ACAGATATGC TGATGAATGA CCTGATTGTG
AATAATAACA CGGAGTCCGG ACCGGAAAGT AATGCATATG TGTATTTCTA TGATGCCAAT
GTGAAGATCA ACCATATTTT TTCACCCCGT GACCGTATCT ATCTAAGTGC ATATATAGGG
CAGGACAAAC TCAGTGTGAA ATGGAAGGAG GGGTCTTCGG ACGGCGGCAT CAGTACTTAT
TCCGGCGATA GCCGTTCTAA TTTCCTCTGG GGAAATTATA CCAGTACTTT ACGATGGAAT
CATGTGTTTG GGCCGAAGAT GTTTGCAAAT GTGACGGTGA ATTATTCACA ATATTATTTC
TCCACTGATT ATAAATACAA CTACAAGCCG CTGAATTCAT TGGATACAGG TATATTATCC
GGTAAATACT ATTCCCGGAT ACAGAATGCC GTGGCCAAGA TGGACTTTGA ATACAGGCCA
CAGCCCAAAC ACACGATTAA ATTTGGTGTC GGTGGCATCA CACATATTTT CACACCAGGT
GTATCTGTAT TTCAGGACAA TGGTAAAGAT CAGCCGGCAG TGGATACCAC TTATGGCGAT
GTGACTTCGG TAGGACAGGA GTTGTATCTG TATGGTGAAG ATGAATGGAA TGCGGCACAT
AATCTCTGGC TGAATCTGGG GGTACATGCA TCCGGTTTCC TGGTGGATGG TCGTTTCTAT
AATTCCATAC AACCCCGTTT AGGTATCCGT TATGAATTGC CGCGCAGATG GGTGCTCAGA
GGTTCGTATA CACATATGAC GCAGTATCTG CATCTGCTGG CTAATAATGC GGCGAGTCTG
CCTACAGATC TGTGGGTTCC ATCATCCGGA AGGGTAAAGC CAATGTTCTC ACGGCAGGGT
TCTTTTGGTG TATCCAAAAC GAGCAGAAGA GGGATGTATG CGATGTCACT TGAGGGCTAT
TACAAGACCA TGGACCATGT GATAGAGTAT AAAGGGGCAG CTTCTCCATT TAACGGAGCA
GGAAAGGATT GGGATGAAGT GGTGGATATT GGTAAGGGGC GTAGTTATGG TGCAGAATTA
TTACTTGAGA AAAAGAAAGG AACAACACGC GGCTGGATAG GCTATACCTT GGCATGGTCA
GAAAGAGCTT TCCCCAGTGT TAATCAGGGA AGAATATTCC CTTATAAATA TGACCGCCGG
CATGACCTGG AAGTGGTGAT CACGCAAAAG CTGGGTAAAC GCTGGGAATT GTCCGCCAGT
TGGGAATATG CTTCCGGTAC GCCTTTGTCA TTACCCAATG CCAGTTATGA AGGGATTAAT
GATCCTTCTC CTTATGATCC GCCACAGAAC GATCCTATAC TGGATCATAT GGGCGACAGG
AATAAGTACC GTACTACACC GATGCACCGG CTGGATCTCA GCGCCACTTA CAGCAAAAAG
AAGCGGCTGT GGACAAAAAG CTGGACGTTC AGTCTGTACA ATGCCTATAA TCAACAAAAT
CCATTCTTTT ACGCCATCGT CACTGACAGG GAGAAACAGG AGCGTTATCT GGCCGAGGTC
AGCATCCTGC CTATTCTGCC TAGTGTGACG TACGCTATTA AATTTTAA
 
Protein sequence
MSLFGRFLLG MLLISISVQA SEWDWRMKIS VVVKDQPLET VCTILEQQYG IHFSYSRNIV 
DLSPLVTINV QNRPLKKALD EIFSPYNISF ARIGDQIVLT VKKHPTATIN GYVQDFKTGE
KLIGATVYSP ILHVGTMTNQ FGFFSITLPQ DTSSLTVSYI GYEPAHLYSG KNDKTPVIVA
LHPKSSLPEV IVDTIRPTEQ STVSRLNVSP AAVKSMPRLL GEADMMRTIV ALPGVSGSLD
GAGSLNVRGG SPDQNLILLD GTPIFNVSHL FGIFSVFNPD IVKNADFYKG AFPARYGGRL
SSIVDISLKD GDMQQYHGEA AIGLIAAKAM VEGPLKKDKT SFLVSARRSH TDMLMNDLIV
NNNTESGPES NAYVYFYDAN VKINHIFSPR DRIYLSAYIG QDKLSVKWKE GSSDGGISTY
SGDSRSNFLW GNYTSTLRWN HVFGPKMFAN VTVNYSQYYF STDYKYNYKP LNSLDTGILS
GKYYSRIQNA VAKMDFEYRP QPKHTIKFGV GGITHIFTPG VSVFQDNGKD QPAVDTTYGD
VTSVGQELYL YGEDEWNAAH NLWLNLGVHA SGFLVDGRFY NSIQPRLGIR YELPRRWVLR
GSYTHMTQYL HLLANNAASL PTDLWVPSSG RVKPMFSRQG SFGVSKTSRR GMYAMSLEGY
YKTMDHVIEY KGAASPFNGA GKDWDEVVDI GKGRSYGAEL LLEKKKGTTR GWIGYTLAWS
ERAFPSVNQG RIFPYKYDRR HDLEVVITQK LGKRWELSAS WEYASGTPLS LPNASYEGIN
DPSPYDPPQN DPILDHMGDR NKYRTTPMHR LDLSATYSKK KRLWTKSWTF SLYNAYNQQN
PFFYAIVTDR EKQERYLAEV SILPILPSVT YAIKF