Gene Cpin_7226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7226 
Symbol 
ID8363420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9028338 
End bp9029216 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content46% 
IMG OID644969360 
Producthypothetical protein 
Protein accessionYP_003126827 
Protein GI256426174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA TGCGTCCGTT TATTGTTGTT GCAATAGTAT GTATGATCAT ATTCGCTGGC 
TGTAGCAAGG AGTCCAGGAT TGCGATACCC TATGATGGCG ATAAGATAGT GCTCAATACG
CTGATACAGC CTGACAGTCT TGTGTATATA AGAGTGACCG GCAGTAAGCC GGTGAAAGAA
TATCAGAATC TGAAGTTCCC CGAGTTGAAA AATGCAGTTG TCATGATGTA TGAAGACGGC
AAAACAATGC CGGCGCCGGA ATGGAAAGTA ATCAATGGGA AAGGATACTT TGTATCCCAT
ATGCCAGCCA GGGCAGGCAG TGAGTATAAG ATCACAGTTA ATTACAGCGG ATTGGCCAGT
GTAACTGCAA CGGACAGCAC GCCACAGCGT CCGGAAATCA GGGACGGAGC TGCACAGAAA
TTGGGCAACA GGGTGCGTTT CACGCTGAAA GACAATATTA ATGAGAAAAA TTACTACAGG
ATACGCGTGT ATAATGCCGA CACTGTAAAC GGTGTCATTA CTCCATTTAA GCGCGATACC
GTAAAGTTCA GACTGGATCC TTCCTTTAAT AACAACTTTG CTGATATTAT AGGCAATAGC
TATAGCGGCG AAGTGATGCT GAGTGATGAA CGTATCAGCG GAAAGGATGT ACTGTTCGTA
TTACAGACAA GCAAACAGGT CACTGCTTCC CACATGATAG TGGAAGTCAG CAATCTGACG
ACGGGCGCCT ATAAATACCT GGACGGCACA TCAGATCAGC GATTGGAAGA CGGCCTTGAT
TTTACGTTGA ATCCGGAGGA TATCTATTCC AATGTGAAGA ACGGATATGG CATCGTTGCG
GGGGTAAACG CCGGCAGACT TTCATTCGCA GTAGAATAG
 
Protein sequence
MKRMRPFIVV AIVCMIIFAG CSKESRIAIP YDGDKIVLNT LIQPDSLVYI RVTGSKPVKE 
YQNLKFPELK NAVVMMYEDG KTMPAPEWKV INGKGYFVSH MPARAGSEYK ITVNYSGLAS
VTATDSTPQR PEIRDGAAQK LGNRVRFTLK DNINEKNYYR IRVYNADTVN GVITPFKRDT
VKFRLDPSFN NNFADIIGNS YSGEVMLSDE RISGKDVLFV LQTSKQVTAS HMIVEVSNLT
TGAYKYLDGT SDQRLEDGLD FTLNPEDIYS NVKNGYGIVA GVNAGRLSFA VE