Gene Cpin_7221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7221 
Symbol 
ID8363415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9023803 
End bp9024837 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content45% 
IMG OID644969355 
ProductHaemin-degrading family protein 
Protein accessionYP_003126822 
Protein GI256426169 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3720] Putative heme degradation protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA CTGCGACTTC TACATTAAAA GAACAATGGC TGAATTTCCG TGAACAACAT 
CCGAAAACAA GAATCCGTGA TGCTGCTCAT CAGCTGCAAG TGAGCGAAGG CGAAATCGTC
GCCGCCTGCA CCGGAACAAC CGTTAAGCAC TTGAAGAATG AATTTCCTGC ACTCATGCAG
GCAATGCCGG CATTAGGTAA AGTGATGGTG CTGACCCGCA ATGAAAATTG TGTAATAGAA
CGTAAAGGCG TTTTTGAAAT AGTAAATACT GAAAACAAAC ATGTCGGTAC CGTATTAGGT
AAAGACATCG ATCTGCGTAT GTTCTTTTCC CGCTGGAAGT ATGGCTTCGC AGTAGAAAAT
GATGAAAGTA TCGGTTTCAA AAAATCTATT CAGCTCTTTG ACGCACAAGG CGGCGCTATC
ATGAAGATAT ATGCGGTAGA TCAGACGGAT CTCAGCGCAT GGGATAAAGT GGTAAGTGAT
TTCACGGCTG CTGAGCAGGT CGCTGCTATT CCTGTTGCGC CAGCGCCCGC CTCACCGGTA
TATAATGATG CAAACGCAGA TGCTGCATCC TTCCTGGAAG GATGGGCAAA CTTACAGGAT
ACGCATGATT TCTTCCCATT GCTGATGAAG CATAAATTAT CGAGAACAGG GGCACTTGAG
CTGGCGGAAG GTAAATTCTC CCGCCGCGTA AACAGTGAAT GTGTAAAAAC ATTGCTTAAC
CAGGCTTCCG CTACTGGTCT TGAAATAATG GTGTTTGTAG GTAACCCGGG CAATATCGAA
ATTCATACTG GTCCTGTACA GAAGATCCTT GAAATTCCAA ACTGGATCAA TGTAATGGAC
GAAGACTTCA ATCTGCATCT CAGAACAGAT ACCATTGCAC AAAGTTGGGT GGTGGAAAAA
CCTTCTGTAG ATGGTATAGT TACTTCACTG GAAGTGTTTG ATGCTGCGGG TGAAATGATT
GCTCAATTCT TTGGTAAACG TAAACCAGGT AATCCTGAAC TGGAACCATG GAGAGCATTG
GCAGCGAGTC TGTAA
 
Protein sequence
MNATATSTLK EQWLNFREQH PKTRIRDAAH QLQVSEGEIV AACTGTTVKH LKNEFPALMQ 
AMPALGKVMV LTRNENCVIE RKGVFEIVNT ENKHVGTVLG KDIDLRMFFS RWKYGFAVEN
DESIGFKKSI QLFDAQGGAI MKIYAVDQTD LSAWDKVVSD FTAAEQVAAI PVAPAPASPV
YNDANADAAS FLEGWANLQD THDFFPLLMK HKLSRTGALE LAEGKFSRRV NSECVKTLLN
QASATGLEIM VFVGNPGNIE IHTGPVQKIL EIPNWINVMD EDFNLHLRTD TIAQSWVVEK
PSVDGIVTSL EVFDAAGEMI AQFFGKRKPG NPELEPWRAL AASL