Gene Cpin_7214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7214 
Symbol 
ID8363408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9015049 
End bp9015768 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID644969348 
Producthypothetical protein 
Protein accessionYP_003126815 
Protein GI256426162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000482628 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA GAAATCTGCT GCTGCCGGCA TTGTCAGCGA TTGTGCTGGC GACTGCCTGT 
AAAAAAACGG AAACAATTGA ACCGCCTGCA CAGGCAAATA ACAGGATACT CTCTTACAAG
GTGACCAACG TGCCCGATGC TGCTGTATAC GGGGCGATAG ACGACGAGAA AGGGACGATT
ACACTCATAC TGCCATACTA TTATTTTCTA ACGGCTATAC AGCCTGAAAT CAGGGTTTCT
GAGGGGGCTA CAGTGACACC CGGTAATGGC GTACTCATTG ATGATATTAC AAAAAAGCTG
AGTGAAGGAA CAAAGGTGGC GTATGTGGTA ACAGGTAAGG ATGGCAGCAA GGCTACTTAC
AACCTCGTAC TGACTACCCA GCAGCCGGAT ATTGCGGTAG ACGAGTTATC TCCGGATCCT
GCTGCTCCGC TGGTGTTATA TCATAGTGAT CCATCCACTT TTCAGTTCAA CTTCTTCAGC
ATCACCGGAA AGAATTTCAT TCCACAGCAG GAATCTCTGG GCATCTTTTC TACGATCAGT
TACCTGAATG AACAGGGTAC GGTGGTATAC ACAGCTGTTA ACGGAGACAA TTATACCAAC
AGTATCGGTA CGGCAGTACC GTCTGCCGAG CAACTGCCTG CGGGCTTGTA CCGTATCCGG
GTTACATCTT ATACCCGATC CGCAACGATG AAGAATCCTG TAAAAGTTGA AACGTTCTAA
 
Protein sequence
MKIRNLLLPA LSAIVLATAC KKTETIEPPA QANNRILSYK VTNVPDAAVY GAIDDEKGTI 
TLILPYYYFL TAIQPEIRVS EGATVTPGNG VLIDDITKKL SEGTKVAYVV TGKDGSKATY
NLVLTTQQPD IAVDELSPDP AAPLVLYHSD PSTFQFNFFS ITGKNFIPQQ ESLGIFSTIS
YLNEQGTVVY TAVNGDNYTN SIGTAVPSAE QLPAGLYRIR VTSYTRSATM KNPVKVETF