Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7213 |
Symbol | |
ID | 8363407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 9014052 |
End bp | 9015020 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644969347 |
Product | hypothetical protein |
Protein accession | YP_003126814 |
Protein GI | 256426161 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000708496 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA CATTTTTTAA TAGAACATAT TCTCAGGTAT TGGCCACTGT ACTGCTGGCG TGCTGGATAA TGGCCGGCGC CTGTAGTAAA GAGAAGGTGG AAGCGCCTTA TCCCTATCAT GAGCTGAAGA CATTTAAGGT CGTAGCTGTA ACAGGAGATA CTATTCAGGC AGCGATTGCA GATGGAAGTA TCATATTGTA CTGGCCGTTT GACGAGCCTG TACCGGCTAC CATTACACCG TTGGTTACTG TGTCTGATAA GGCGACAGTA TTACCGGCAT CAGGTACTGC AATTGCTGTT AAGGACAGTG TCTCCTATGT GGTGACAGCG CAGACCGGTG TTACAGCGTC TTATAAACTT CGGATAATTG TGAATCAACC GGAGTTGCAG ATCAATAGTG GTACTGATAT GGTAGGCCAG CTGGGAGCTA ACCTGAGCAT AGGAGGTATT ACTTATGTGA TACCAGATCT GAATGTAACA AGTGCTTACC TGGTATCGGC AAAAGGCGTA GAGACCAAAT GTACGATCAA TGGTTTCACT GAACTGGGCG CAAATGACTA TGCGCTGGAA ATGGCAACAC CTGATGTGGA TACAGGTAGT TATAAGTTGA AGGTGGTAAG TGCCACTAAA ACTGTGACGA GCGAGAAGGC TTTTGTGAAA GTTATTTATC CTTTGCCATC TGTAGTAGCA CCAACGACGG CTATTACTGT AAAGAGAGGC GAAAGATTTA CACTGAACGG CAACAATATG AGAGGTATGC TGGCCGGAAG AGCCCGACTT GCTGGCGGAC AGGTCTATTA TGACCTGGAA CTGGCTGAGT TTAATCTGAC CAGTGTGACT TACCGCATAC CTGCCGATTT CCCGTTGGGG AATTATAACC TGCTACATAC GGCATTCCGG AATTATCAGG GAGTGACGGT ATATCAGCGT GCGGGAACAA TTAATCCGGT TCTGATCATT ACAGAATAA
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Protein sequence | MTMTFFNRTY SQVLATVLLA CWIMAGACSK EKVEAPYPYH ELKTFKVVAV TGDTIQAAIA DGSIILYWPF DEPVPATITP LVTVSDKATV LPASGTAIAV KDSVSYVVTA QTGVTASYKL RIIVNQPELQ INSGTDMVGQ LGANLSIGGI TYVIPDLNVT SAYLVSAKGV ETKCTINGFT ELGANDYALE MATPDVDTGS YKLKVVSATK TVTSEKAFVK VIYPLPSVVA PTTAITVKRG ERFTLNGNNM RGMLAGRARL AGGQVYYDLE LAEFNLTSVT YRIPADFPLG NYNLLHTAFR NYQGVTVYQR AGTINPVLII TE
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