| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7207 |
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| Symbol | |
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| ID | 8363401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9007303 |
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| End bp | 9008829 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969341 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003126808 |
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| Protein GI | 256426155 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA GAAATTTTGA TTCCACTTTT TGTGGAAGCG TACCCCTTCA TCAGATTAAC
CTGATACAGC CCTATGGTAT GCTGCTGGTA ATCCGGCAGG CAGATTATAA GATTGTACAG
GTCAGTGAAA ATATTACAGT GGCCGTAGGC CGGCAGGCGC CGGAAATAGT GGATACCCTG
TTGTCAGATT ATATCCCGGC CAGCCAGATG AAGGAACTAC AGCGCAAACT GGATGAAGGT
CTGGTGAATA AACTGCCTTT TACCCTGACC TTTACAGGTG CGGATGGCCC TAGAGATTAT
CTGGCTATCA CCCACTTGTC AGGGGAAGCG TTGATACTTG AAATAGAAGC ATTGAGCCCG
GCTGGTGAAG AAAATTCTTT CATCAATATT TATCAGCAGC TGAAGTATGC GATGGCCGCT
ATCAATGCGG CGCCGTCTAT CCAGGTTGCC TGTGAAACAG CTGCAAAACA GCTGAAAGCC
TTGTCCGGAT ACGACAAGGT AATGGTATAC CAGTTTGACA AAGACTGGAA TGGTACCGTG
ATCGCTGAAG AACAGGAACC TGGTATGGAA TCTTATCTGG GCCTCACCTT CCCGGCATCT
GACATTCCCC GTCAGGCCAG GGCGATGTAC CTGGACAATC CTTACCGCAT GATCCCCAAC
AGGGAATATG TGCCTGTAAG CCTTTACCCG GTGATCAATC CGCTGACTAA CGCTTTTACT
GACCTCTCCG GATGTAACCT GCGCAGTGTG CCTGCCGTAC ACCTGGAATA TATGAAGAAC
ATGGAGATCA TGACTTCCAT GTCCTGCCGT ATCCTGAAAG ATGGCCAGTT ATGGGGACTG
TTCTCCTGCC ACCACCGTAC GGCATACCAG TTGCCTTACG AAGGCAGGGC GTTGTTTGAA
TTGCTCTCAG ATATTATCGC CGCACGTATC CAGTCGCTTT ATTATAAAGA ACAAAGTGAC
GAATACACGA AATTACACGA TGTGCATACC CGCCTCGTAG AACAGGTATT TACCGGTAGT
GACCTGACGG AGGGATTACT GGGGCGTGAA ATAAATGTTT TACAGCTGCT CGATGGGGCT
GGCGCTGCGA TGATGCACAA CAGGCGCCTG GAGACTGTTG GTAAAGTGCC TGACAAAAAT
GAACTGAAGG ACCTGTTCCT CTGGTTGCAG AGTACTTCTG CTTCCGGCCA GGTATTCCAG
GAACTTCATC TGCCAGGAAC CTACGAACCC TCTATACAGT ATGCGGAAAT TGCCAGCGGT
ATACTGGTCA TTCCTATCCA GCCTAATAAG GGAGAGTTCC TGGTGGTTTT CCGCCCGGAA
GTGATTCAGC AGGTGAACTG GGGAGGAAAT CCCAATGAGG CGGTACGTTT CGAAAAAGAT
AATATACAAT ACCATCCCCG CAACTCGTTT AGTATCTGGC AGCAGACGGT CCGTAATACA
GCACTTTCCT GGAAGCAAAC AGAAATCCAG ATGGCTGGCT TGCTCCGTAA CTTTATCCTG
GAATTTATTG TTAGAGGCCT CGATTGA
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| Protein sequence | MQKRNFDSTF CGSVPLHQIN LIQPYGMLLV IRQADYKIVQ VSENITVAVG RQAPEIVDTL
LSDYIPASQM KELQRKLDEG LVNKLPFTLT FTGADGPRDY LAITHLSGEA LILEIEALSP
AGEENSFINI YQQLKYAMAA INAAPSIQVA CETAAKQLKA LSGYDKVMVY QFDKDWNGTV
IAEEQEPGME SYLGLTFPAS DIPRQARAMY LDNPYRMIPN REYVPVSLYP VINPLTNAFT
DLSGCNLRSV PAVHLEYMKN MEIMTSMSCR ILKDGQLWGL FSCHHRTAYQ LPYEGRALFE
LLSDIIAARI QSLYYKEQSD EYTKLHDVHT RLVEQVFTGS DLTEGLLGRE INVLQLLDGA
GAAMMHNRRL ETVGKVPDKN ELKDLFLWLQ STSASGQVFQ ELHLPGTYEP SIQYAEIASG
ILVIPIQPNK GEFLVVFRPE VIQQVNWGGN PNEAVRFEKD NIQYHPRNSF SIWQQTVRNT
ALSWKQTEIQ MAGLLRNFIL EFIVRGLD
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