| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7202 |
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| Symbol | |
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| ID | 8363396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8997239 |
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| End bp | 8998249 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969336 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003126803 |
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| Protein GI | 256426150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA TCACCCGATA TTTCTTTGCA GCTGCCTTCT TACTGGCAGG ATGTAAACAT
AAAACGCCAC AGCCAGTTGC AACAGACGAT CCGGCTCCTG TTGTTACCAA TAACGGACAG
CAGATCACGT TTCCAGATAG TGCTTCCACC AGCTTCTTTT CAGTAGAATC AGTAGGCGAT
TCTGTACTCA GCGGCACATT ACATGCACCG GGTAAAGTAG CAGCAACCGT CGTCCGTGGA
GACGAAGGCG GACAAAACAT CGTATTATTT GATGATCCGG GTCTGAACAG TGATTATTCA
CAGCTCATAC AACATAAGAT CAACATCAAT CATATACAGC AGATCAATAT CACACAGCGT
AAAATAGAAC TCGATCGCAC ACAGGATCTG TATGACCATG GTGCTGCCAG TGGTAAAGAT
ATACTGGAAG CGAAGTCCAA CCTTTCTATG GAACAGACCA ATCTGGCCAA TGAGAAAACA
CAGCTGATAG AACATGAATC AGGACTAAAA GCAGCAGGAT TCGATCCGGA AGCATTGCGC
AGTACTAGTC CGGGGTCAGC TTATATCATC TGTGACATTC CGGAAAATCA GCTGAATAAT
GTAAAGAGAG GCGCACCCTG TACGGTGGTA CTGTCTTCAT TTCCCAACAA CACATATGAT
GCAAAGGTAG AAGACATTGC AGATGTAATT GATGATGTAA CACGCATGAT CAAACTGCGC
ATACGACTGA ACACACCCGA TACAGACATC CGTGCAGGCA TGTTTGCAAC AGTCACCTTC
CAGGTACACG GCGATAATAA AGGTATTAAC ATCAACAGGG ATGCACTGGT CACTTCTGAA
GGACAGAACT ATGTGTTTGT ACGCACAGCG CCTAATACGT TTACCAGGAG AGAGATCCGT
ACCGGACAAC AGATCGGTGA ACGCATCGCT GTATACAGCG GCTTACAGAA TGGCGAAAGC
GTCGTTTTAA AAGGCGTCAT GCAACTGAAA GGACTGAGCT TCGGCTATTA A
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| Protein sequence | MQRITRYFFA AAFLLAGCKH KTPQPVATDD PAPVVTNNGQ QITFPDSAST SFFSVESVGD
SVLSGTLHAP GKVAATVVRG DEGGQNIVLF DDPGLNSDYS QLIQHKININ HIQQINITQR
KIELDRTQDL YDHGAASGKD ILEAKSNLSM EQTNLANEKT QLIEHESGLK AAGFDPEALR
STSPGSAYII CDIPENQLNN VKRGAPCTVV LSSFPNNTYD AKVEDIADVI DDVTRMIKLR
IRLNTPDTDI RAGMFATVTF QVHGDNKGIN INRDALVTSE GQNYVFVRTA PNTFTRREIR
TGQQIGERIA VYSGLQNGES VVLKGVMQLK GLSFGY
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