| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7201 |
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| Symbol | |
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| ID | 8363395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8995981 |
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| End bp | 8997237 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969335 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003126802 |
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| Protein GI | 256426149 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAG CGATCGTCCT GGCTGTAGCA ACATTGGCAC TATCCTGTAT GGGGATCGTT
GCTACCGCCC AAACTAACTA CACACTATCA GCGGCATTAG ATACCGCCCG CACCAGCAGC
CCCGTACTGA AAGCAAGGTA CATGAACATA AATGCAGCAC AGGCGGACGT CATTACAGCC
AGACTACGGC CTAATCCCAA TCTGAACAAT CAGACCATGC AACTGGTCAG TAGCGATCAT
TTTGCCCCCG GCACAAGATG GTCTTCCAAT CAGAACAGAC AGGTATGGTA CCAGCTCACA
AAGCCGGTTC AATGGCCCAA TCAGCGTAAG TACAAAATAG AAACGGCTGA TAAAGACGTT
ACTCTCGCCA ACAACACCTA CGAGGAAGAT GTACGTAACC TCTCCCTGAA CGTGGGGTCC
AGCTGGATCA ACTGCTGGGT GCTGAAGAAA AGGCTGGCAC TGCTCAACGA AAGCAGGACT
AATCTGGATA CCCTCGTAAA GATCAATGAA CTGCGCTATA AAGACCAGGT CATCTCACAG
ACAGACCTGA CGCGTACAAA GGTGCTGCTC TCGCAATATG ATCTGCAACT GAGTGTATTT
ACCCAGGATT ATCAGAATGA ACTGCATACC CTGCAACTCC TCACGGGTAA TACGACACCC
ATGGAGATCG ACACCAGCAA TGAGATACTG ACATTCGTGC CTTCCCTTAC ACTGGATAGC
CTCATTGCGC AGACCATGGA TAACCGCTCC GATGTTATAC TGGCAAAAAA CACCATCGAT
GAACGGGCCA GCAATGCAAA ATATCAGCGA TCCCTGGCAG TACCGCAACC GGAACTGGGG
GTTATCTATA ATCCGCAGAA CGCCGTTCCA TATATAGGTT TCTATGGCGC TATCGATCTG
CCTTTCTTCA ACAGGAATCA GGGGGAGATC AAAAAAGCAC AGATACAACA GCAACAGGCG
CAACAGGAAT TGTCTGCCAC ACAACGACAG GCACAAACAG AAGTAGTCAC CGCTTACAAT
ACCTATCAGC TGCAACAGAA AAACATTGAG AAGTACAGCG GTATCCTGCA TCAGTCACAA
CAGATCCTGG ACAATGTGAA ATACGCCTAC CTGCGCGGAG GTACCAGTAT CATCGACTTC
CTCGACGCAC AACGCAACTG GTACGATACC CGCCTGCTGT ACTATGATTC CTTACAGGCG
TACTACCAGA GCTATATACA ATTATTATTT GCTACCGGCC TCATAAACCA ATTATAA
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| Protein sequence | MKRAIVLAVA TLALSCMGIV ATAQTNYTLS AALDTARTSS PVLKARYMNI NAAQADVITA
RLRPNPNLNN QTMQLVSSDH FAPGTRWSSN QNRQVWYQLT KPVQWPNQRK YKIETADKDV
TLANNTYEED VRNLSLNVGS SWINCWVLKK RLALLNESRT NLDTLVKINE LRYKDQVISQ
TDLTRTKVLL SQYDLQLSVF TQDYQNELHT LQLLTGNTTP MEIDTSNEIL TFVPSLTLDS
LIAQTMDNRS DVILAKNTID ERASNAKYQR SLAVPQPELG VIYNPQNAVP YIGFYGAIDL
PFFNRNQGEI KKAQIQQQQA QQELSATQRQ AQTEVVTAYN TYQLQQKNIE KYSGILHQSQ
QILDNVKYAY LRGGTSIIDF LDAQRNWYDT RLLYYDSLQA YYQSYIQLLF ATGLINQL
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