| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7177 |
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| Symbol | |
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| ID | 8363371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8963534 |
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| End bp | 8966449 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644969311 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126778 |
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| Protein GI | 256426125 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACTCC TGTCGCTGGT AGCGTTTTCC CAGAACAAGG TCATCACCGG TAAAGTAACC
GATGCACAGG GGAATACTCC CTTACCAGGA GTGACGGTAC AGATACAGGG TACGAGTAAG
GGTACACAGA CTGCACCGGA TGGTACTTAC AAACTGGAAG CGCCACAGGG TGCTACTACA
CTGGTTTTCA CGTTTGTCGG ATATAAGAAA CTGGAACAGC CTATCAGTGC TTCAGGCACT
ACGAATGTGA CGATGGCGGC TGACGTTACT GCATTGAAAG ATGTGGTGGT AGTCGGTTAT
GGTACACAGA AGAAAACAGA GGTTACTTCC GCAATCACTT CTGTTACAGC TGAGGACTTC
AGACAGAGTG GTGCGCGTAA CGCAATGGAC CTGGTACAGG GTAAAGTGGC TGGTTTACAG
ATCACACGTA CCAGCGGTTC CAACCCCAAT AATGGTCCGG CTATACAGCT GCGTAGTGTG
ACCACATTGA ATAAAAATCA GGGGCCATTA ATTGTAGTAG ATGGTATTCC TGGTGGTAAT
CTCGACCTGC TGCAACAGGA TGATATCGAG TCTATCTCTG TGCTGAAAGA TGGTTCTGCT
GCTGCGATTT ATGGTACACG CGCAAACGCG GGCGTTGTGC TGATCACTAC GAAAAGAGGG
AAGGCGGGCG CTCCACGTGT AGACTATAAT ACGTATTTCC GCAAAGAGTA TACACAGCGT
ATGCCCAAGT TCCTGACAGC TGATGAATAT GCTGCAAAGA TTGCCAGTGG TGAAATCAAA
TCAGAAGACA AAGGCCACAG AACTAATTTT CCTGATCTGC TGATCAATCA TGATAATCTT
ACACAGTATC ATAACCTGGC TTTTTCAGGG GGTAGTGAAA ATACCAGTTA CCGTGCGAGT
GTATATTATT CCAATCTGGA AGGTGTATTA AAAGAGAATG AGCGCCAGCA GTATGGTGGT
CGTCTGAGTA TTACCTCAAA AGGTCTGGAC AATCGTCTGA CCGGCCAGTT TAACCTTGCC
ACTAATGTTA ACAATGCGAA TCTGCTGACG GATGGTGGCA ACCTGGTGGG ATATTTTACT
TTCCAACCTA CTTATTCTCC TTATAATGAC GATGGTTCCT GGTACTTCGA ACAGACGAGC
ACCAATGAAC TGGCCCGTTT ACACCAGCAG ACTTACAAAC GTCAGCAGCA GACAACTTCT
GCAGATGCAA AAGTGTCACT GGATCTCGTG AAAGGATTGA AGGCATCCAT CTTTGGTGCG
GTAACCCGCG ATAGCTGGAC AGATGGTCAG TACGCTGATC GTGCGTCTGA GCTTTCTATA
GAGACCTATC AGGGAACTGG TTGGGCAGCA CAGAACAGTG AACTTAAATT AAAGTATGCA
GTAGAGCCTA CGCTTGAGTA TAATCTGACT GCGAATCAAC ATACGATTTC AGCAGTAGCT
GGTTACAGCT ATCGTTATGA TGTGGATCAA GGTTTTGATG GTAGCAACTA TGGTTTTCTG
AATGACAGAT TTCATGAAGA CAATCTGGGC GCTGGTAACC AGATCAAGTT AGGTAAAGCG
ACACTTGGCA GTTACAAAAA CGACAATACG CTGATCGCAT TCTTCGGAAG AGTGAACTAT
GTATTCAACG ATAAATACAT GGCATCAGCT ATTATACGTC GTGAAGGCTC CTCTAAATTT
GGTGTTAATA ATAAATGGGG AAATTTCCCG GCTATCTCTG CGGGATGGAA TCTGCACAAA
GAAGATTTCC TGAGTAATGT TAGTTTCATT GATCAGTTGA AAGTACGACT TGGTTATGGT
GTAACCGGTA ACTCTGATTT TGATAACTAT GCTTCCCTTG TACTGTTAGG GACTGGCGGC
GCATACATTT ATCCTGATGG TGTATGGCGT GAGACGTATG GCCCTAACAC GAATCCGAAC
CCGGACCTAA GATGGGAAAA GAAAGCTGAG TGGAACTTCG GTATTGATTA CACCTTCTTT
AAAGGTCGTT TAGGTGGTTC CATTGACCTG TTTAGTCGTA AAACAACAGA CCTGATATCC
ACATTTAAAT CTCAGGTACC ATCACAGGTA CAACAGGACA TCTGGACTAA CGTGGGTACT
TTCAAGTCAA AGGGTATAGA GTTGATGGTG AATGCTGTAA CAATGGATAA GAAAGATTTT
CGCTGGAATA CAGATGTTAC TTTCAGTACG GCAAGTAACA TAGTGTCTTC TTTCTCTAAC
CAGACTTACA AGATGACATT CCTTGACCGT GGTGATATCG GTGGCTATGG TGCACTTGGA
AACGCGCTGA GAACATATGA AGGTGGTAAA CTGGGTAACT TCTATGGTAA ACGTTTTGCC
GGATTCACTG ATGATGGTAA ATGGCGTTTT TATAAGAGAG ACGGTTCTAC AGGTCCTGCG
GACGAGATCA GCCGTGACAA TGATCAGACG GTGATCGGAA ACGCTATTCC CAAATACTAT
GCATCCATGA CGAATAGCTT TAAATATAAA AACTGGGACC TGCGCATCTT CATGCGTGGT
AAGTTCGGCT TCGATATTCT GAATACTAAT GAATTGCTGT ATGGGAACAA GGCAGCTTTG
CCAAGTAATG TGCTGCAAAC TGCATTCACC AAACACGCTA AACTGAATGA TAGTTTCCAA
TATTCCGATT ACTATCTTGA AAACGGTAGC TATTTAAAAC TGGATGAGGT AACCCTTGGT
TACAATGTTC CATTCAAAAA TAAATATATC CGTAACATGC GGGTATACTT CACAGGAGGT
AATCTGGCAA CTATTACCGG TTACTCAGGC AACGATCCTG ACTTTGTAAA AGATACAGGT
CTGAATCCGG GTATTGATGC ATTGAACAAC AGTGATGACC GCAGATCTTA TCTGAGCACA
AGATCCTTCA TGCTGGGATT AAATGTGGGC TTCTGA
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| Protein sequence | MLLLSLVAFS QNKVITGKVT DAQGNTPLPG VTVQIQGTSK GTQTAPDGTY KLEAPQGATT
LVFTFVGYKK LEQPISASGT TNVTMAADVT ALKDVVVVGY GTQKKTEVTS AITSVTAEDF
RQSGARNAMD LVQGKVAGLQ ITRTSGSNPN NGPAIQLRSV TTLNKNQGPL IVVDGIPGGN
LDLLQQDDIE SISVLKDGSA AAIYGTRANA GVVLITTKRG KAGAPRVDYN TYFRKEYTQR
MPKFLTADEY AAKIASGEIK SEDKGHRTNF PDLLINHDNL TQYHNLAFSG GSENTSYRAS
VYYSNLEGVL KENERQQYGG RLSITSKGLD NRLTGQFNLA TNVNNANLLT DGGNLVGYFT
FQPTYSPYND DGSWYFEQTS TNELARLHQQ TYKRQQQTTS ADAKVSLDLV KGLKASIFGA
VTRDSWTDGQ YADRASELSI ETYQGTGWAA QNSELKLKYA VEPTLEYNLT ANQHTISAVA
GYSYRYDVDQ GFDGSNYGFL NDRFHEDNLG AGNQIKLGKA TLGSYKNDNT LIAFFGRVNY
VFNDKYMASA IIRREGSSKF GVNNKWGNFP AISAGWNLHK EDFLSNVSFI DQLKVRLGYG
VTGNSDFDNY ASLVLLGTGG AYIYPDGVWR ETYGPNTNPN PDLRWEKKAE WNFGIDYTFF
KGRLGGSIDL FSRKTTDLIS TFKSQVPSQV QQDIWTNVGT FKSKGIELMV NAVTMDKKDF
RWNTDVTFST ASNIVSSFSN QTYKMTFLDR GDIGGYGALG NALRTYEGGK LGNFYGKRFA
GFTDDGKWRF YKRDGSTGPA DEISRDNDQT VIGNAIPKYY ASMTNSFKYK NWDLRIFMRG
KFGFDILNTN ELLYGNKAAL PSNVLQTAFT KHAKLNDSFQ YSDYYLENGS YLKLDEVTLG
YNVPFKNKYI RNMRVYFTGG NLATITGYSG NDPDFVKDTG LNPGIDALNN SDDRRSYLST
RSFMLGLNVG F
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