Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7176 |
Symbol | |
ID | 8363370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8961881 |
End bp | 8963512 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644969310 |
Product | RagB/SusD domain protein |
Protein accession | YP_003126777 |
Protein GI | 256426124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA TTTCGAAAAT AGCAACATAT GCAGCGCTCG CATTACTTCC TGTATTTGGG AGCAGCTGTA CCGACTTGAC TGAAAATGTG TATGACCAGA TCGATACACG TAATTTCTAT AACAATAAAG AAGAAGTAGT ATCGGCAGTA TTAAGACCAT ACACCCATGC GAATGCCTGG GTAACGCCTG GTCAGAATGG ATGGTGGCGT TTGAGTGAGT TATCGGCAGA TCAGCTGGCA TGGCCACAGA AAGGTCGTCA TGGTTATGAT GGTGGTAACT GGATACGTCT GCACTATCAT ACCTGGTTGG TGGATGATGG TCCGATCCTG GACTGTTGGT ATTTAACATG GACAGGTTTG GGCTTTTGTA CAACAGCTAT TGAGAATCTG GAACGTCGTG AGGCCGGTGA GATGGGTATT ACTCAGGCGG AAAAAGATGC ATACGTGTCT GAGTTAAGGT TATTGCGTGC ATTCCACTAT CTCCGTATCA TGGATATCTG GGGTAATGTG CCTATCGTGA CACAAGTAGG TATTCCTGTT AGTCCACCTA CAGCAACGCG TAAAGAAGTA TTTGACTTTG TTGAAAAAGA GATCCTTGAT CATATTGAAG ATGCGCCGTT GTTGAGTAAA GCGTTGATCG GACGTATGTC CAAAGCGGGT GCTTATTCCA TGCTGGTAGA GCTGTATCTG AATGCGGAGA AATGGAGTGG TACACCAAGA TGGGATGACT GTATCGCTGC TGCCAATAAA CTCATCAATG GTGAAGCGGG TGGTATGAAT GGTACACTTG CGCTGGATAC TAATATCACA GATACTTATA AGCCGACCAA CGATCTGTCT AAGGAAATCA TTTTTTCTAT AGCATATGAT TACCAGGTGG CAGATTTTAC ACCACAGTGG ACCGGTGACT TCTATCACTT TAACCAAGGT CTTATCAATG GTAATGACCG TAATGGTAAT GATGGTGTTG TTGTTATTCC TGGTGTGTAT ACCACTTTCA GCGATGCAGA TAAGCGTAAG AAAGAATGGA TATCAGCAGG TCCGCAATGG AAATATGGTT CAGCCGATAC AATACCTGTA ATTGCAAGTG GTGGTAACGA GTATAACGGC GAACAGCTGG TATTCGTTGA CAATATCCGT AAGAACAAGC TTGGCAGCAC TACATCAGAT ATGACACAGG GTGAAGAAAA CAGCGGTGTT CGTTTCAATA AATACAAACT GGGACCGATC AACGATCCTC ATTACAGAAG CACTGACTGG GCTGTATATC GTCTGTCATG GGTATATTTT GCAAAGGCTG AGGCACTGAT GCGTAAGAAT GGCGGAACAG CTACTCAGGA AGCGGTTGAC CTGGTGAATG CCTGTAAACA ACGTGCTTTT GCGCCTGCAG TATGGGAGGC GAATAAGTAT ACTACTTCTA CGCTGACTAT GGATGAACTG CTGGCCGAAC TGGGTCGTGA GTTTATCTTT GAAGGTTACC GTCGTCAGGA GCTGATCCGT TGGAATAAGT TTACCACTGC TACCTGGTGG GATCACAGGG CTTCTGAGTC ATTCAGAGAA CTTTTTGCAA TTCCTCAGGT ACAACGTGCA CTGAATGTTA ACCTGGAACA GAATCCTGGT TATCCTAAAT AG
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Protein sequence | MKRISKIATY AALALLPVFG SSCTDLTENV YDQIDTRNFY NNKEEVVSAV LRPYTHANAW VTPGQNGWWR LSELSADQLA WPQKGRHGYD GGNWIRLHYH TWLVDDGPIL DCWYLTWTGL GFCTTAIENL ERREAGEMGI TQAEKDAYVS ELRLLRAFHY LRIMDIWGNV PIVTQVGIPV SPPTATRKEV FDFVEKEILD HIEDAPLLSK ALIGRMSKAG AYSMLVELYL NAEKWSGTPR WDDCIAAANK LINGEAGGMN GTLALDTNIT DTYKPTNDLS KEIIFSIAYD YQVADFTPQW TGDFYHFNQG LINGNDRNGN DGVVVIPGVY TTFSDADKRK KEWISAGPQW KYGSADTIPV IASGGNEYNG EQLVFVDNIR KNKLGSTTSD MTQGEENSGV RFNKYKLGPI NDPHYRSTDW AVYRLSWVYF AKAEALMRKN GGTATQEAVD LVNACKQRAF APAVWEANKY TTSTLTMDEL LAELGREFIF EGYRRQELIR WNKFTTATWW DHRASESFRE LFAIPQVQRA LNVNLEQNPG YPK
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