| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7157 |
|---|
| Symbol | |
|---|
| ID | 8363351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8943281 |
|---|
| End bp | 8944156 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644969292 |
|---|
| Product | lipase class 3 |
|---|
| Protein accession | YP_003126759 |
|---|
| Protein GI | 256426106 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAGT CAACACAGGC CATAGCACTG AAATATGCGC ATTTTATAGA CGCTGCGTAC
CAGGTAAAGG AACAGAGTCC GTCACAGGAA CAATACCCCT TCTTCCCACC GGGTTATACG
CTGGTCTATA ATCTTCACAG GAAAGATACC GGTAAAGGCA AGGCAGGACT CGCATATAGT
GGTTTTCTGG CCAGAAGTAA CTTTTCACCG GATGCACCTA CTACTTATGT GCTGGCGCTC
AGAGGATCTG CTGAGTTTCT TGACTGGGCA GAGCGGCTCG ATATACTCCC TTCTCCAAGC
CCTTTTGGCA ATAACAGTGG AAATGTCGTA TCCGGATTTC TGGATATGTA CAACGGAATG
ACCTTTTCAG AGCCCGGGCA AACAAAACCC AAAGGGCTGT TAAAATATAT CAGATATAGC
ATCCATTATA CCAATATGCA GTCGGAAGAT GACACACAGC CTATGGTATG TACCGGTCAT
GGTCTGGGTG CGGCGATGGC TACGCTGTTT GCCGTGGGAG ATGCTTACAC CCTGCATCCC
TGCCGCTTAT ACACATTTGG ATCGCCTTGT GTGGGTGACG CTGCTTTTGT TTCTTTTCAC
AATTCGCTGA TCACAACCAG CGAGAGGTAT TACAATCTGC CTGACCTTAT ACCTACACTG
CTGGATGCAT TTGGTTACGA CCATGTGCAC AATGGCATAC CCCTGGATTC ACTGGGGGAT
GCCTCCCTCG GATGGTTACC TGATTGTACA CATTCCCTCA GAACATACAT GTACATGCTC
GGCGCTGCTA ACACAGTGCT GAGCGAGAAT TGCCTTATCT CCGATATAGA CGATGACGTC
ATGATTAAAA AATTGAGTTT TCGAAGAAGA TATTAG
|
|---|
| Protein sequence | MVKSTQAIAL KYAHFIDAAY QVKEQSPSQE QYPFFPPGYT LVYNLHRKDT GKGKAGLAYS
GFLARSNFSP DAPTTYVLAL RGSAEFLDWA ERLDILPSPS PFGNNSGNVV SGFLDMYNGM
TFSEPGQTKP KGLLKYIRYS IHYTNMQSED DTQPMVCTGH GLGAAMATLF AVGDAYTLHP
CRLYTFGSPC VGDAAFVSFH NSLITTSERY YNLPDLIPTL LDAFGYDHVH NGIPLDSLGD
ASLGWLPDCT HSLRTYMYML GAANTVLSEN CLISDIDDDV MIKKLSFRRR Y
|
|---|
| |