Gene Cpin_7152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7152 
Symbol 
ID8363346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8938482 
End bp8939357 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content49% 
IMG OID644969287 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_003126754 
Protein GI256426101 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATT TGAAAATAGG TTGGGCAGGT TTAGGCCATA TGGGTGTTCC TATGGTAACA 
AACCTCGTCA AAGCCGGCTT TGACGTAACA GTATACAATC GTACAACAGA CAAGGCGATC
GCATTGCAGG AGACACTGGG CGTTAAAGTG GCGCATTCTC CCAGGGAACT GGCAGAAAGC
AAAGACATGA TCATCACCAT GGTAACCGAT GATGCAGCAT TAAAAGAAAT TTATGAAGGT
ACGGACGGCG TGCTTTCCGC CACATTACAG CGGGATATGC TGGCAATCGA TATGAGTACC
GTATCTCCGG ATACAACCCG GCAACTGGCT ACTTTATGCG AAGCAGCAGG TATCTGGTAC
CTGGATGCAC CTGTGTCTGG TAGCGTAAAA CCTGCACAGG AAGCCCAGCT GGTGATTATG
GCAGGTGGAA GATCTGAAGA TTTTGAACGT GCTAAACCCA TCTTCAATGC ACTCGGTAAG
GCAGCACACC TGCTGGGTGA TGCCGGCGCC GGCAACTATG CAAAACTGGC CATTAACACC
TTCCTGGGCA TCACATTACA GGGATTATCG GAAGCAGTGA TATTTGCACA GAATAATGGC
ATACCGCCCG CACAATTCCT CCCCCTGATC AACAATGGTC CTATAGGCAG CGCCATTACC
AATCTGAAAG CAACTAACAT CGTTAACCAT GATTTCACAC CTGCGTTTCA GTTAGGTCTG
CTGGCAAAAG ATATCAGACT GGCCAAAGGC CAGGGACTCG ATACGCCTAT CGGCAATGCC
CTCTTCGACA CCTTACAGGA TGCACTGACA CAGGGACTGG CTACCTCGGA TATGAGCGCC
ATCTATCAGT ATCTTGAGAA TAAATATGCA GAATAA
 
Protein sequence
MNHLKIGWAG LGHMGVPMVT NLVKAGFDVT VYNRTTDKAI ALQETLGVKV AHSPRELAES 
KDMIITMVTD DAALKEIYEG TDGVLSATLQ RDMLAIDMST VSPDTTRQLA TLCEAAGIWY
LDAPVSGSVK PAQEAQLVIM AGGRSEDFER AKPIFNALGK AAHLLGDAGA GNYAKLAINT
FLGITLQGLS EAVIFAQNNG IPPAQFLPLI NNGPIGSAIT NLKATNIVNH DFTPAFQLGL
LAKDIRLAKG QGLDTPIGNA LFDTLQDALT QGLATSDMSA IYQYLENKYA E