| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7141 |
|---|
| Symbol | |
|---|
| ID | 8363335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8928677 |
|---|
| End bp | 8930062 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644969276 |
|---|
| Product | KWG repeat protein |
|---|
| Protein accession | YP_003126743 |
|---|
| Protein GI | 256426090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAGT TTATGCATAT TCAATGGCAT CCACAACTAT TAGCCCTTAT CTTACTCATC
ACAGGCTGTA AAAATACTAA GCCGGAGTAT GTCAGAAAAT ATACACTTCT ATTTGAGCCG
GCACTTCTTC ATGCAATTGT CGCAGATGCG CCATCTCGTC CCGATCCTTA TCCGCTTTTC
AGAATAAGGG AAAAAATGCG CACAGGTTAC ATCGACAGAG AGGGTAATCC AGTCATACCT
CCTGCTTTCG TTGCTGCTGG CGACTTCTCA GAAGGACTCG CAGCCGCCCG TGCAGGTGGA
TACTATGGAT ACATTGACAA GACCGGGCAA TTTGTTATTC CTCCCAGATA CGATTTCGCA
ACGGAGTTCT CTGACAATAC CGGATTGGTA TATAAAGATG GACTCCCCAT CTTTATCGAC
AGGAAAGGAA ACAAACTTTT TGAACATCCC TTCCTGCAGG CAGGTCCTTT TACAAAGGGA
CTCGCTTTAA TCACCACCGC CTCCCACAAA CCCGGTGTAA TCAATAAAAA AGGAGTACTA
GTCATAGATA CGATCTACCA CAGCATTTAT CCCTTTAGAA ATAATCTGAC CATCGCCGGT
GATCAGGATG GAAACAAAAT GGTACTACTG GACACTGCCG GCAAACGTAT TACCCCTCCG
ACAGGTATCC ATAACGCCAA TGCCTTAAAA GAATATTACG AAAAACTTCC TGTCACGGAA
ACTACCAAAG GTCAGCGGAT TGATGGTAAT TATCTTGTGG ATATGGGCAA TGGTATCACG
CTAAACGTAC AACATGGTGA CGTTTTCTAT ATGGATGAAA GAAAATATGT GTTATGGCAG
TTCGCTAAAT CAGTAGACTT TCCACATGAC TATGACATCG ATTATAAAGC CACCGGATAC
TATCTCATAA AAGAAGATCC CAAGCCGGTC TATCATTGTA AACAACCATT ACCACCAGGC
GAATTCAGTC TGACAGTGAT ACCCGATATC CGCGAAACTG AGCATGGATT TTTCAATGGC
AACGGCTACT GTACCATTCT TGCTAATCGT TCAGGACAAG CCATTACATT TGAGAAATAT
GGGTCAGCAC TCCTTATGAG AATGCAGGCG AAAACAAATA CTGGTGAATG GCGGGACATT
GAAGAGATAA GCAGCGATTG CGCCAATGGC TTAGATAACA TGACTTTACG ATCCGGTCAT
TATCTCCACA TGGTATCTCC CGCTTACAGC GGTCCGGTTA AAACAAAACT AAGATTGCAG
TTTGCCTACG TCAGCTATGG TGAACCGCAC ACGATTTATA GCAATGAATT CAATGGCAGC
ATCAATCCGG GACAGCTATG GCGATCTGAA CGGAACTTTC ATTCCACTGA CTATCTCCTT
CCATGA
|
|---|
| Protein sequence | MYQFMHIQWH PQLLALILLI TGCKNTKPEY VRKYTLLFEP ALLHAIVADA PSRPDPYPLF
RIREKMRTGY IDREGNPVIP PAFVAAGDFS EGLAAARAGG YYGYIDKTGQ FVIPPRYDFA
TEFSDNTGLV YKDGLPIFID RKGNKLFEHP FLQAGPFTKG LALITTASHK PGVINKKGVL
VIDTIYHSIY PFRNNLTIAG DQDGNKMVLL DTAGKRITPP TGIHNANALK EYYEKLPVTE
TTKGQRIDGN YLVDMGNGIT LNVQHGDVFY MDERKYVLWQ FAKSVDFPHD YDIDYKATGY
YLIKEDPKPV YHCKQPLPPG EFSLTVIPDI RETEHGFFNG NGYCTILANR SGQAITFEKY
GSALLMRMQA KTNTGEWRDI EEISSDCANG LDNMTLRSGH YLHMVSPAYS GPVKTKLRLQ
FAYVSYGEPH TIYSNEFNGS INPGQLWRSE RNFHSTDYLL P
|
|---|
| |