| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7136 |
|---|
| Symbol | |
|---|
| ID | 8363330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8924145 |
|---|
| End bp | 8924633 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644969271 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003126738 |
|---|
| Protein GI | 256426085 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAG CAGCATTTCT TGAACATACG ATGCCGCATC AGGGGATTAT CTATAAGGTA
GTGAATATCT ATGCTGATAA TAAAGAAGAT AAAGAAGATT TGTTGCAGGA GATCTGGTTA
CAGCTATGGT TATCTTTTCC CCGCTTCAGT TTTAAGAGTA AGACGTCTAC CTGGATGTAC
CGGGTGGCAT TAAATACCGC ATTGACCTAT TTAAGAAAAT CTGCTGTACG CAATAAACAT
GTCTTTAGTA CGGATATTGT ACCATCTGCG CAGGGAGAAG ATCATGTGCC GCGTGAACAG
GAACAGCTGT TATGGGAAAT GATCCGCTCT TTGCCTAAAG CAGAAAAAGC CTTGATTCTT
TTATACATCG AAGGGATCAG TTATCGTGAA ATTGCAGATA TCACGGGTGA TTCCGAAAAC
AATGTAGGTG TTAAGCTGAG CCGTATCAGG CAGAAACTGA AAGATGCAAT CATGCGTAAA
AAAACGTAA
|
|---|
| Protein sequence | MTKAAFLEHT MPHQGIIYKV VNIYADNKED KEDLLQEIWL QLWLSFPRFS FKSKTSTWMY
RVALNTALTY LRKSAVRNKH VFSTDIVPSA QGEDHVPREQ EQLLWEMIRS LPKAEKALIL
LYIEGISYRE IADITGDSEN NVGVKLSRIR QKLKDAIMRK KT
|
|---|
| |