| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7130 |
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| Symbol | |
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| ID | 8363323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8919823 |
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| End bp | 8921160 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969264 |
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| Product | putative deaminase |
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| Protein accession | YP_003126732 |
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| Protein GI | 256426079 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTA CTCATATTTC CAGGAAAGAT TTTATCAGAA ATTCTGCACT CGCCACATTA
GGACTGGGTA TCACACCTTC CCTGCTGTCG GATGTAAAAG CTGCAAACCC ACACGAAACA
AACACGATCG CTGGTAGTAA GAATCTGAAA CTGAAGAATG TACGCCTGGA AACAGGATTT
GAATATGAAG GCGATGAAGT GATCGCTACC AAAACCGGAC TATTCTGCGT TGAAATAGCC
AATGGAAAAA TCACCGCTAT TCTGCCTAAT GCCCCAAAGG CCAATGCAAC AGATGCCAAA
GGTCTCCTGA TGCTGCCTGC TTTCAAAGAC ATGCACATCC ACCTGGATAA AACCTTCTAT
GGTGGTCCAT GGAAAGCTGC CAGAAGAAAA CAGGGCGGTG TAAAAGGAAT GATCGCACTG
GAGCAGCAGA TCCTTCCGGA AATGCTGAAA ACCTCCACCG ATCATGCAGA AAAATTAATC
GCATTATTGC AGTCCTGTGG CTCCAGCTTT GCCCGGAGCC ACGTCAATAT CGAACCTACC
TCCAAACTGG ACTCTCTTAA AAACCTACAG AAAGCGCTGG AAAATAAAAA AGACTCCTTT
GGTGCAGAAC TGGTCGCTTT TCCACAACAC GGACTGTATT ATGCAGATTC TACTTCCCTG
ATGAAAGAAG CGGCTAAGAT GGATATTGAT TTTATCGGAG GAGTAGACCC TTATTCGCTG
GACGGTGAGA TTGCCAAACC GATGGACTTC ATTGTTAAAC TGGCACTGGA TAATAACAAA
GGGATTGACA TCCACCTGCA TGAATCAGGA GATTCCGGAT TGAAAACGGT CGAATACCTG
ATAGACAGGG TCAATGAAAA TCCCGTTCTG AAAGGAAAAA CCTTCCTGAG TCATTGCTTC
GTATTGGGTA AACTGGAAAA ACAGAAACAG GAAGAAATTG CAGATAAACT GGCGCAGGCA
GAAATCGGGA TTATGTCTAC GATCCCTTTC GGCGGATTGA TCATGCCGAT TCCTACGTTG
TACAAATACG GTGTAACGGT CGGTACGGGG AATGACAGTA TTATTGATCA CTGGAATACC
TGGGGCCTGG GTAGCGTGCT ACAGAAAGCC AATCTGATGG CTCAGCTATA TGGCAATTCC
ACAGAATTCC TCCTGTCACG TAGTCTCAGA CTGGCTACCT ACAACATCCT GCCACTCGAT
GACAAAGGGC AGCAACAGTG GCCAAAGAAA GGCGATGCTG CCGATGTGGT ACTGATTGAT
GCCAGTTGCT CGGCAGAAGC AGTATCCAGG ATATCTCCTG TCAGGTCATT GATCCATCAG
GGCAAGATTG TCTTCTGA
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| Protein sequence | MRSTHISRKD FIRNSALATL GLGITPSLLS DVKAANPHET NTIAGSKNLK LKNVRLETGF
EYEGDEVIAT KTGLFCVEIA NGKITAILPN APKANATDAK GLLMLPAFKD MHIHLDKTFY
GGPWKAARRK QGGVKGMIAL EQQILPEMLK TSTDHAEKLI ALLQSCGSSF ARSHVNIEPT
SKLDSLKNLQ KALENKKDSF GAELVAFPQH GLYYADSTSL MKEAAKMDID FIGGVDPYSL
DGEIAKPMDF IVKLALDNNK GIDIHLHESG DSGLKTVEYL IDRVNENPVL KGKTFLSHCF
VLGKLEKQKQ EEIADKLAQA EIGIMSTIPF GGLIMPIPTL YKYGVTVGTG NDSIIDHWNT
WGLGSVLQKA NLMAQLYGNS TEFLLSRSLR LATYNILPLD DKGQQQWPKK GDAADVVLID
ASCSAEAVSR ISPVRSLIHQ GKIVF
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