Gene Cpin_7117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7117 
Symbol 
ID8363310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8907295 
End bp8907909 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content45% 
IMG OID644969251 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_003126719 
Protein GI256426066 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA AACAACTATT CAACGTCTTG CTGGCGGTAG CGCTTTTTGC AGCTTTGGGT 
GTACATGCGA AAAGTGCACC CAACAATGAT ACGGCCACCT TCGCGACAGG TTGCTTCTGG
TGCGGTGAAG CGAAGTTTTC ACAATTGAAA GGTGTGATCA AAGTAACTTC CGGTTATACA
GGCGGACGTA TTGCAGATCC ACGCTACTCA CTGGTGAGTA CCGGCACGAC CGGTCACGCG
GAAGCTTTCA ATGTGATTTA TGACAGTACC GTCATCACTT ACGATGAACT GCTGGAAGCC
TTCTTTCTTT CCCATGACCC GACAGAATTA AACAGGCAGG GAAATGACGT CGGCACACAG
TATCGTTCCG CCATATTTTA TCATAACGAC GCACAAAAAG AACGGGCTGC CTACTATCTG
AATAAATTCA CCGAACAGCA TATCTATCCC AAACCCATCG TTACGGAACT GACACGCTTC
ACGGTGTTTT ATGAGGCAGA AACATATCAC CAGCAATACT ATAAAAAACA TCCGACGCAA
GATTATTGCC GCTACGTTAT CCAGCCAGAA CTGGAAAAAT TCAAACTCAT CTTCAAAGAC
AAATTAAAGC AATGA
 
Protein sequence
MKIKQLFNVL LAVALFAALG VHAKSAPNND TATFATGCFW CGEAKFSQLK GVIKVTSGYT 
GGRIADPRYS LVSTGTTGHA EAFNVIYDST VITYDELLEA FFLSHDPTEL NRQGNDVGTQ
YRSAIFYHND AQKERAAYYL NKFTEQHIYP KPIVTELTRF TVFYEAETYH QQYYKKHPTQ
DYCRYVIQPE LEKFKLIFKD KLKQ