Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7115 |
Symbol | |
ID | 8363308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8904820 |
End bp | 8906796 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644969249 |
Product | Protein-disulfide reductase |
Protein accession | YP_003126717 |
Protein GI | 256426064 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TATTAATAAT TATTGGTTGT CTGATGCATT TTGCCGCGTT CGCCCAGATT GACAACCCGG TCCACTGGAC CTTTACAGCA GCCCCTGCGG GTGATAACAA GGTAGAGATC AGCGCTACCG CCCAGATCGA TGAAGGCTGG CATTTATACT CACAGTTCCT GAAAGAAGGC GGACCCGTTC CCACCTCCTT TCAGTTTGAC AACGCAGAAA GTTACCATCT GGTAGACGGT GTTACCGAAA GTCCTGCGGC TACAAGCGGG TACGATTCGA CTTTCGAAAT GACCATCCTT TACCATGAGA AAAGTGTCAC CTTTAAACAA CTGATCACCT ATACAGACCC TGCTGCACAA ATTAAAGGAC AGGTGCATTA TATGGTGTGC AGTGGCCAGA AATGCCTCCC CCCTACGGAT GTAGACTTTG AAGTAGCCGT CGATGCGACC GTAAGTCATG CAGCGAATAC AGCGCAGGTA CAAAAAGACA ATGCTCCTGC TGATAAACAA AGTCCGGTGA ATGATAGTGG TAGTTCCATT TTATCCATCT TCCTCGCAGG ATTTTTAGGT GGCCTTGCTG CATTCTTCCT GCCATGCATT TATCCGATGG TACCCTTAAC CGTATCATTC TTCACCAAAC AGTCCAAAAC ACGCAGACAG GGCATCCGCG CAGCCATCAT CTATGGTTGT TCAATCATTG TGATCTATGT AGGATTGGGC TTACTCATTA CGGCTGTTTT TGGCGCCTCT GCATTGAATG AAGCCTCCAG CAGCGCAGTA TTCAACCTGT TGTTCTTCAC CATCCTGGTA GTATTCGCCT TATCATTCCT TGGTGCATTT GAGATCACGC TTCCATCTGT GTTTGTCAAC AGCATTGATC AGAAGTCAGG TAAAGGTGGC TGGATCGGAT TATTCTTTAT GGCCTTTGCA TTGGCACTGG TATCATTCTC CTGCACTGGT CCGCTGATAG GTACACTACT CGTTGAAGCA GTAAGCAAGG GTAGCTATCT GGGGCCGGCC ACTGGTATGT TTGGTTTCTC GCTGGCCCTC GCTTTACCAT TTACTTTATT TGCCATCTTT CCTTCATGGC TGAAAAGTTT ACCGAAATCA GGTGGCTGGT TAAATTCCGT AAAAGTTACA CTCGGATTAC TTGAACTGGC TCTCGCCTTT AAATATCTTA CCAATGTGGA TCTGGCTTAC CATTGGGGGC TGCTGAGCCG CGATCTGTTC CTCGTCATCT GGATCATCAT TTTTGGTGTA CTGGCTTTCT ATCTGTTAGG GAAAATCAGA TTAAGCCATG ATTCCGAAGT AAAGACGCTC TCCATCCCCA GACTATTACT TTCTATGCTG GCACTGGCCT TTACCGTTTA CCTCATTCCC GGCCTCTTTG GGGCTCCACT GAAAGGGATC AGCGGATGGC TGCCACCACA ACAAACGCAG CAATTCACCC TGGGTGCCGC TAATGCAGAT AAACCGGCTG GAAGTTCCAC CCATAAATAT GCAGGTTTAT TCCACGCCCC CGAGAATATC GATGCTTTTT ACGATTACGA TGAAGGCATG GCATACGCAA AGAAAATGCA TAAACCTGTC CTCCTCGATT TCACTGGCTG GAGTTGTACC AACTGCAGAA AAATGGAGGC GGCCGTTTGG TCTGACCCGG AGGTATTGAA ACGTTTAAAA GAAGACTATG TGCTGATCTC CCTGTATGTG GACGACCGCA CCTCTCTTAG CAACACAGAA AAGTATGTTT CTAAAGTTTC ATCAAAATCC ATCAATACAA TCGGACAGAA ATGGAGCGAT CTGCAACAGG AACGTTTCAA CACAAACGCT CAGCCGTTTT ATGTGATCCT GGACCCGGAC GGTCAGCCAA CAGCTGAACC GAGAGCCTTC AATTTAGACA TTAAAGCATA CGTCGATTTT CTTGACATGG GTATTTCCTC AGTAAGAAAA AAATTAACTG TTCAACTATC TAACTAA
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Protein sequence | MKKLLIIIGC LMHFAAFAQI DNPVHWTFTA APAGDNKVEI SATAQIDEGW HLYSQFLKEG GPVPTSFQFD NAESYHLVDG VTESPAATSG YDSTFEMTIL YHEKSVTFKQ LITYTDPAAQ IKGQVHYMVC SGQKCLPPTD VDFEVAVDAT VSHAANTAQV QKDNAPADKQ SPVNDSGSSI LSIFLAGFLG GLAAFFLPCI YPMVPLTVSF FTKQSKTRRQ GIRAAIIYGC SIIVIYVGLG LLITAVFGAS ALNEASSSAV FNLLFFTILV VFALSFLGAF EITLPSVFVN SIDQKSGKGG WIGLFFMAFA LALVSFSCTG PLIGTLLVEA VSKGSYLGPA TGMFGFSLAL ALPFTLFAIF PSWLKSLPKS GGWLNSVKVT LGLLELALAF KYLTNVDLAY HWGLLSRDLF LVIWIIIFGV LAFYLLGKIR LSHDSEVKTL SIPRLLLSML ALAFTVYLIP GLFGAPLKGI SGWLPPQQTQ QFTLGAANAD KPAGSSTHKY AGLFHAPENI DAFYDYDEGM AYAKKMHKPV LLDFTGWSCT NCRKMEAAVW SDPEVLKRLK EDYVLISLYV DDRTSLSNTE KYVSKVSSKS INTIGQKWSD LQQERFNTNA QPFYVILDPD GQPTAEPRAF NLDIKAYVDF LDMGISSVRK KLTVQLSN
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