Gene Cpin_7115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7115 
Symbol 
ID8363308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8904820 
End bp8906796 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content46% 
IMG OID644969249 
ProductProtein-disulfide reductase 
Protein accessionYP_003126717 
Protein GI256426064 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TATTAATAAT TATTGGTTGT CTGATGCATT TTGCCGCGTT CGCCCAGATT 
GACAACCCGG TCCACTGGAC CTTTACAGCA GCCCCTGCGG GTGATAACAA GGTAGAGATC
AGCGCTACCG CCCAGATCGA TGAAGGCTGG CATTTATACT CACAGTTCCT GAAAGAAGGC
GGACCCGTTC CCACCTCCTT TCAGTTTGAC AACGCAGAAA GTTACCATCT GGTAGACGGT
GTTACCGAAA GTCCTGCGGC TACAAGCGGG TACGATTCGA CTTTCGAAAT GACCATCCTT
TACCATGAGA AAAGTGTCAC CTTTAAACAA CTGATCACCT ATACAGACCC TGCTGCACAA
ATTAAAGGAC AGGTGCATTA TATGGTGTGC AGTGGCCAGA AATGCCTCCC CCCTACGGAT
GTAGACTTTG AAGTAGCCGT CGATGCGACC GTAAGTCATG CAGCGAATAC AGCGCAGGTA
CAAAAAGACA ATGCTCCTGC TGATAAACAA AGTCCGGTGA ATGATAGTGG TAGTTCCATT
TTATCCATCT TCCTCGCAGG ATTTTTAGGT GGCCTTGCTG CATTCTTCCT GCCATGCATT
TATCCGATGG TACCCTTAAC CGTATCATTC TTCACCAAAC AGTCCAAAAC ACGCAGACAG
GGCATCCGCG CAGCCATCAT CTATGGTTGT TCAATCATTG TGATCTATGT AGGATTGGGC
TTACTCATTA CGGCTGTTTT TGGCGCCTCT GCATTGAATG AAGCCTCCAG CAGCGCAGTA
TTCAACCTGT TGTTCTTCAC CATCCTGGTA GTATTCGCCT TATCATTCCT TGGTGCATTT
GAGATCACGC TTCCATCTGT GTTTGTCAAC AGCATTGATC AGAAGTCAGG TAAAGGTGGC
TGGATCGGAT TATTCTTTAT GGCCTTTGCA TTGGCACTGG TATCATTCTC CTGCACTGGT
CCGCTGATAG GTACACTACT CGTTGAAGCA GTAAGCAAGG GTAGCTATCT GGGGCCGGCC
ACTGGTATGT TTGGTTTCTC GCTGGCCCTC GCTTTACCAT TTACTTTATT TGCCATCTTT
CCTTCATGGC TGAAAAGTTT ACCGAAATCA GGTGGCTGGT TAAATTCCGT AAAAGTTACA
CTCGGATTAC TTGAACTGGC TCTCGCCTTT AAATATCTTA CCAATGTGGA TCTGGCTTAC
CATTGGGGGC TGCTGAGCCG CGATCTGTTC CTCGTCATCT GGATCATCAT TTTTGGTGTA
CTGGCTTTCT ATCTGTTAGG GAAAATCAGA TTAAGCCATG ATTCCGAAGT AAAGACGCTC
TCCATCCCCA GACTATTACT TTCTATGCTG GCACTGGCCT TTACCGTTTA CCTCATTCCC
GGCCTCTTTG GGGCTCCACT GAAAGGGATC AGCGGATGGC TGCCACCACA ACAAACGCAG
CAATTCACCC TGGGTGCCGC TAATGCAGAT AAACCGGCTG GAAGTTCCAC CCATAAATAT
GCAGGTTTAT TCCACGCCCC CGAGAATATC GATGCTTTTT ACGATTACGA TGAAGGCATG
GCATACGCAA AGAAAATGCA TAAACCTGTC CTCCTCGATT TCACTGGCTG GAGTTGTACC
AACTGCAGAA AAATGGAGGC GGCCGTTTGG TCTGACCCGG AGGTATTGAA ACGTTTAAAA
GAAGACTATG TGCTGATCTC CCTGTATGTG GACGACCGCA CCTCTCTTAG CAACACAGAA
AAGTATGTTT CTAAAGTTTC ATCAAAATCC ATCAATACAA TCGGACAGAA ATGGAGCGAT
CTGCAACAGG AACGTTTCAA CACAAACGCT CAGCCGTTTT ATGTGATCCT GGACCCGGAC
GGTCAGCCAA CAGCTGAACC GAGAGCCTTC AATTTAGACA TTAAAGCATA CGTCGATTTT
CTTGACATGG GTATTTCCTC AGTAAGAAAA AAATTAACTG TTCAACTATC TAACTAA
 
Protein sequence
MKKLLIIIGC LMHFAAFAQI DNPVHWTFTA APAGDNKVEI SATAQIDEGW HLYSQFLKEG 
GPVPTSFQFD NAESYHLVDG VTESPAATSG YDSTFEMTIL YHEKSVTFKQ LITYTDPAAQ
IKGQVHYMVC SGQKCLPPTD VDFEVAVDAT VSHAANTAQV QKDNAPADKQ SPVNDSGSSI
LSIFLAGFLG GLAAFFLPCI YPMVPLTVSF FTKQSKTRRQ GIRAAIIYGC SIIVIYVGLG
LLITAVFGAS ALNEASSSAV FNLLFFTILV VFALSFLGAF EITLPSVFVN SIDQKSGKGG
WIGLFFMAFA LALVSFSCTG PLIGTLLVEA VSKGSYLGPA TGMFGFSLAL ALPFTLFAIF
PSWLKSLPKS GGWLNSVKVT LGLLELALAF KYLTNVDLAY HWGLLSRDLF LVIWIIIFGV
LAFYLLGKIR LSHDSEVKTL SIPRLLLSML ALAFTVYLIP GLFGAPLKGI SGWLPPQQTQ
QFTLGAANAD KPAGSSTHKY AGLFHAPENI DAFYDYDEGM AYAKKMHKPV LLDFTGWSCT
NCRKMEAAVW SDPEVLKRLK EDYVLISLYV DDRTSLSNTE KYVSKVSSKS INTIGQKWSD
LQQERFNTNA QPFYVILDPD GQPTAEPRAF NLDIKAYVDF LDMGISSVRK KLTVQLSN