Gene Cpin_7113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7113 
Symbol 
ID8363306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8903999 
End bp8904568 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content44% 
IMG OID644969247 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003126715 
Protein GI256426062 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATGA ACATTAAGAA AGTATCGATC GTTGCCATGC TGGCTATCGG GTGCAGCCTT 
TTTATTGCTG CTCCGGCTGC AAAAGCACAG ACAATGCAGG AACAACATAC GCTGGCTAAG
GGAGAGAATG TACCCGAATT TTCACTGAAG GATCAGGACG GGAAGACTTT TAACCTGGCA
GATGTGCTGG GGAAGAAGAA ACTTGTAATT TTCTTTTATC CAAAAGATGA AAGTCCTGTT
TGTACCAAGG AAGCATGTGC TTTCAGAGAT GCTTATGAGA AGTATAAGGA TGCCGATGCT
ATGGTTATCG GTATCAACAA TGGTACTGTG GAAAGTCACA AGGCGTTTGC AAAAAAGAAT
CGTCTGCCAT TTACATTGCT GAGCGATCCG GACAATGTTG TGTTGAACAA GTTCGGTGTG
AAGGAACAGG ATTTTGGAAA CAATGTAAAG GTGAGCGGTC GTGAAACCTT TGTGATTGGC
CTGGATGGTA CGATCGTTTA CAGTTTCCGC GATTTCATGA AAGGCGATGA GCATGCTCAG
CAGGTTTTAA ATTACCTGTC GGGTAAGTAG
 
Protein sequence
MRMNIKKVSI VAMLAIGCSL FIAAPAAKAQ TMQEQHTLAK GENVPEFSLK DQDGKTFNLA 
DVLGKKKLVI FFYPKDESPV CTKEACAFRD AYEKYKDADA MVIGINNGTV ESHKAFAKKN
RLPFTLLSDP DNVVLNKFGV KEQDFGNNVK VSGRETFVIG LDGTIVYSFR DFMKGDEHAQ
QVLNYLSGK