Gene Cpin_7111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7111 
Symbol 
ID8363304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8900866 
End bp8902017 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content39% 
IMG OID644969245 
Productacyltransferase 3 
Protein accessionYP_003126713 
Protein GI256426060 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAT TACAAGGTAA AAGATTCGAA GCGTTAGATA GTTTCAGGGG CATTTGTGCA 
TTACTGGTAG TATGTTATCA CGCACGTATC CTTTTAAGTG TGGCAGAACT TCCGTTTTTC
CGCCATGCAA ATTACTTTGT TGAATTCTTC TTTGTACTGA GTGGCTTTGT TATGTATCAT
ACCTATGGCG CGAAGACGAT GGACAGTAAC CGCTTTAAAG ATTACCTGAC CAGCCGTTTT
TTTCGCATAT ATCCGATGCA TATCCTTGTA TTGACAGTGG TAATAGGCCT TGAGTTTATG
AAACTCCTGG GCCAGCAAAA AGGATTTTAT TTCAATAATG CCGCATTTAC TGCTTCTGCC
GATCCAAAAT ATATTCTCCC CAATATCTTA CTGATACAAG CCTGGGTGTC AGAATCAGCC
GCATTGTCTT TTAATGTACC TTCCTGGAGT ATCAGCATTG AGTTTTATCT GTACATCATA
TTTGGCGTCC TTATGTGGAA AGCCGGCAAA ATGAAAAATA TATTCTTTGT GGCCATCGTA
TTGGTGGCAG GTACACTGAT AATGATCAAT CAACTGCCAT TAACTGACCA GGCCATGCGC
GGCTTACTTT GTTTTTTTGC GGGTTGTCTT TCTTACATGG CTTACAAAAA GATAGCTTTC
ATCAATAGCA ATAAACTCCT TTTTACCATA CTGGAACTTG TACTGGCACT CCTGATCATT
TATACCATAG TCGCAGATTT CAGTGGTGTA TATAAAGGCA TTGTTACCAC ACTGCTTTTT
TGTGTTACGA TTATCACCTT TGCAGTCGAA GGAGGAGCTA TCTCAGCACT GTTACGGAAT
AAGGTGTTTA CTTATCTCGG AAAATTATCT TATTCGATCT ATATTACTCA TTACATCATC
TATTTCCTCT TTTTAGCAAC GGCTATAGTC TTATCAAAAG TGATTGGCCA TGACTTAACG
ATCGTGGATA ATTCAGGTGC TGTTGCCACC CGGTTTATTA CAACCCATCA TGTTATATAC
GATCAGCTGA TACTGCTGGC CTTATTACTT GTTGTCATTG TTATTTCAGG TTTTACTTAT
AAATATGTGG AGCTTAAAGG CATTGAGCTG GGCAAAAGAT TTAAGAAAAA GCGGGCTGCA
GCAGTAGCAT AA
 
Protein sequence
MQALQGKRFE ALDSFRGICA LLVVCYHARI LLSVAELPFF RHANYFVEFF FVLSGFVMYH 
TYGAKTMDSN RFKDYLTSRF FRIYPMHILV LTVVIGLEFM KLLGQQKGFY FNNAAFTASA
DPKYILPNIL LIQAWVSESA ALSFNVPSWS ISIEFYLYII FGVLMWKAGK MKNIFFVAIV
LVAGTLIMIN QLPLTDQAMR GLLCFFAGCL SYMAYKKIAF INSNKLLFTI LELVLALLII
YTIVADFSGV YKGIVTTLLF CVTIITFAVE GGAISALLRN KVFTYLGKLS YSIYITHYII
YFLFLATAIV LSKVIGHDLT IVDNSGAVAT RFITTHHVIY DQLILLALLL VVIVISGFTY
KYVELKGIEL GKRFKKKRAA AVA