Gene Cpin_7110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7110 
Symbol 
ID8363302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8899339 
End bp8900514 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content51% 
IMG OID644969243 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003126712 
Protein GI256426059 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAG CATATATCGT AGCCGGATTC AGAACCGCTG TGGGTAAGTC CAAGCGGGGC 
GGCTTTCGCT TTTACCGGCC TGATGACCTG GCCGTGGATG TAATTACAGG TTTGTTAGCG
AGTGTGCCAC AACTCGACCC TAAAAGAGTA GATGACCTGA TAGTAGGTAA CGCTGTTCCC
GAAGCAGAAC AGGGTTTGCA GATCGGTCGT ATGATCTCTG TACGTGCGCT TGGGATAGAA
GTACCAGGTG TGACGGTGAA CCGTTACTGT GCTTCCGGAT TGGAAACAAT TGCGATTGCA
ACCGCGAAGA TCCAGTCAGG AATGGCGCAC TGTATCATCG CAGGTGGTAC AGAGAGTATG
AGCCTTGTAC CTGTAGCCGG TTGGAAAACA GTGCCGAATT ATACAGTCGC TTCCACCACA
CCGGAATATT ATCTGGGAAT GGGATTGACA GCAGAAGCGG TTGCGCGTGA GTACAATATA
TCACGTGAGG ACCAGGATAC TTTTGCCTAT AATTCGCACC AGAAGGCCCT GAAGGCGATC
GAAAACGGAT ATTTTAAAGA AGGTATTTTA CCGATCAGTG TAAACGAAGT ATATGTGGAT
GAAAAAGGCC GCAAACAGAA CCGGACTTAC ACTGTTGATA CGGATGAAGG TCCGCGTGCA
GATACTTCAC CGGAAGCACT GGCTAAACTA AAACCCGTGT TTGCTGCCGG TGGTAGTGTA
ACCGCAGGTA ATTCGTCTCA GACTTCTGAT GGCGCTGCAT TTGTGGTGGT CATGAGTGAA
ACGATGGTGA AGGAACTGGG ACTGCAACCT ATCGGCAGAT TGGTAGCCTG TGCCTCCGCC
GGCGTGCATC CGCGTATCAT GGGTATCGGA CCGGTAGCCG CTGTGCCTAA AGCATTGCAG
CAGATCGGCA AGACGCTGAA CGATATAGAC CTGGTAGAAC TGAATGAAGC GTTTGCATCC
CAGTCAGTAG CGGTCATCCG TGAACTGGGT ATCGATCCCG AACTGGTGAA TATCAATGGT
GGCGCCATCG CATTGGGTCA CCCGCTGGGT TGTACCGGCG CTAAACTCAC CGTACAGATT
CTCAGCGATC TGAAACGCCT GAACAAGAAA TATGGTATTG TGACGGCTTG TGTGGGCGGC
GGACAAGGAA TTGCCGGCGT AATTGAAAGA ATGTAA
 
Protein sequence
METAYIVAGF RTAVGKSKRG GFRFYRPDDL AVDVITGLLA SVPQLDPKRV DDLIVGNAVP 
EAEQGLQIGR MISVRALGIE VPGVTVNRYC ASGLETIAIA TAKIQSGMAH CIIAGGTESM
SLVPVAGWKT VPNYTVASTT PEYYLGMGLT AEAVAREYNI SREDQDTFAY NSHQKALKAI
ENGYFKEGIL PISVNEVYVD EKGRKQNRTY TVDTDEGPRA DTSPEALAKL KPVFAAGGSV
TAGNSSQTSD GAAFVVVMSE TMVKELGLQP IGRLVACASA GVHPRIMGIG PVAAVPKALQ
QIGKTLNDID LVELNEAFAS QSVAVIRELG IDPELVNING GAIALGHPLG CTGAKLTVQI
LSDLKRLNKK YGIVTACVGG GQGIAGVIER M