| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7085 |
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| Symbol | |
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| ID | 8363277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8866381 |
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| End bp | 8868021 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644969218 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_003126687 |
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| Protein GI | 256426034 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.555692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAG TTATCAGAAT GCCCCTTTTG AGTGACACTA TGACTGAAGG GGTGATCGCG
GAATGGCATA AAAAGGTAGG TGATACCGTA AAAGCAGACG ACGTAATTGC TGAGGTGGAA
ACAGATAAAG CCACCATGGA AGTAATGGGT TATGTGGAAG GTACTCTATT ATATATTGGT
GTCGAGAAAG GTAAGGCTGC TAAAGTAAAT GAGATTATAG CTATTGTAGG GAAACCAGGT
GAAGACTACA AGTCTTTGCT GGGTGGAGGA AATAATAATG GCCAGGCCGC ACCTGAGGCT
AAGCCAGCAG CTCAGGAAGC TTCCGCTCCG GCTCCTGCCG CAAGCACCGC AGACAGCGCA
GCTGTTGCTG AAGCACTGAA AAACGCCACT GTTATCCGTA TGCCGCTGTT AAGCGATACC
ATGACAGAAG GTAAAATCGT AGCCTGGAAC AAGAAAGTGG GCGACACCGT AAAAAGCGAT
GACGTATTAG CAGAAGTGGA AACTGATAAA GCGACCATGG AAGTAATCGG TTATGCGGAT
GGTGAACTCC TTTATGTAGG CGTAAAAGAA GGTGATGCTG CTAAAGTAAA CGGCATCATT
GCAATAGTAG GTAAAAAAGG TACCAATGTT GACGTTATCC TGGCTGCAGA AGGCACAGGT
GGCGCTAAAC CGGCCGCTCA GGCAGCACCA GCAGCTACTC CGGCTGCATC TGCAGCTCCT
GCAGCTACTC CTGAAGTTTC TGAAAATAAA GATGGTGGTC GTGTAAAAGC ATCTCCGCTG
GCTAAGAAAC TGGCTGAAGA AAAAGGTATC GATATCAATA AAGTAACTGG TTCCGGCGAC
GGTGGCAGGA TCGTGAAGAA AGACGTAGAT AGCTTTGTTC CATCTGCTGC TCCGGCTGCA
GCCGCGAAAC CAGGTGCTGC TCCTGCTGCG AAAGCTGCGG CATTTGCACC AGCAGGTCAG
GAAGGTCATA CAGACATCCA GCTGAGCCAG ATGCGTAAAG TGATCGCTAA GCGTCTGAGC
GAAAGCAAAT TCTCCGCTCC TCACTTCTAC CTGAAAGTAG ATATTAACAT GGATAAAGCG
ATTGAAGCGC GTAAAGCTAT CAACGAAGTA TCTCCTGTTA AGATCTCCTT CAACGATATG
GTGATCAAGG CTTCTGCCCT GGCATTGCGT CAGCATCCTG ATGTAAACAG CAGCTGGATG
GGTGATTTCA TCCGCCAGAA CCACCACGTA CACATCGGTT CTGCTGTGGC TATCGAAGAT
GGTCTGATCG TTCCTGTAAT TCGTTTTGCT GATCAGAAAT CGCTGAGCCA GATCGCGGCT
GATGCGAAAG AGCTGTACGA CAAAGCGAAA AACAAAAAAC TGCAACCACA GGATTTCTCT
GGTAATACCT TCACTATCTC CAATCTGGGT ATGATGGGTA TCGACGAGTT CACTGCTATC
ATCAACCCTC CGGATTCCGC AATCCTGGCT GTAGGTGGTA TCAAAGAAAC CGTTGTTTCT
GAGAAAGGAC AGTTCAAAGC TGTAAACATC ATGAAACTAA CCCTGAGCTG TGACCACCGT
AGTGTGGACG GAGCAGTAGG CGCACGTTTC CTGGCTACGC TGAAGAGCTA CCTGGAAAAT
CCGGTTACAA TGCTGGTATA G
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| Protein sequence | MAEVIRMPLL SDTMTEGVIA EWHKKVGDTV KADDVIAEVE TDKATMEVMG YVEGTLLYIG
VEKGKAAKVN EIIAIVGKPG EDYKSLLGGG NNNGQAAPEA KPAAQEASAP APAASTADSA
AVAEALKNAT VIRMPLLSDT MTEGKIVAWN KKVGDTVKSD DVLAEVETDK ATMEVIGYAD
GELLYVGVKE GDAAKVNGII AIVGKKGTNV DVILAAEGTG GAKPAAQAAP AATPAASAAP
AATPEVSENK DGGRVKASPL AKKLAEEKGI DINKVTGSGD GGRIVKKDVD SFVPSAAPAA
AAKPGAAPAA KAAAFAPAGQ EGHTDIQLSQ MRKVIAKRLS ESKFSAPHFY LKVDINMDKA
IEARKAINEV SPVKISFNDM VIKASALALR QHPDVNSSWM GDFIRQNHHV HIGSAVAIED
GLIVPVIRFA DQKSLSQIAA DAKELYDKAK NKKLQPQDFS GNTFTISNLG MMGIDEFTAI
INPPDSAILA VGGIKETVVS EKGQFKAVNI MKLTLSCDHR SVDGAVGARF LATLKSYLEN
PVTMLV
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