Gene Cpin_7070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7070 
Symbol 
ID8363262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8846258 
End bp8847628 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content43% 
IMG OID644969203 
Producthistidine kinase 
Protein accessionYP_003126672 
Protein GI256426019 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACCAT TGAAGAAAGT ATTTCCCATA ATTGTGGTGT TAATTACCCT GTCATTATTG 
GGAATCATCT GGATCCAGGT TAACTGGATC TATAACGCCG CTATCGTACG TCGCGAGCAG
ATGGAACAGC GCGCAGTAAA CGTAATGCTG GACGTGAAGG AGAAGATGCT TCAACGTAAA
GCGCCTCCTA TGCGTTTTAA AGTAGATGGC GCTGCCATCC GGCCTACTGA AAAGGGATTG
GCGATTGATA AGTATGAGAT CACCAATACT ATCGATCTGA CAACGAGTGT CAGCGATCGC
TTCACAACAA GAGAAGTGCA GGAGATGATC GCTAAAAGTC TGCGTGAGCA ACACCTGGAT
ACAACATTCG AATTTGCCAT ATTGGGTAAA GGTCATTTTG GCAATAGCAA CGGCATCCGT
ATGCAATCTG CCGGATTGTC CAAAATGCTT GAAAATACCA CCAGCTCAGA TAGCCTTGAC
TATACGTTCC AGTATATACC ACTGGTGAAT AGCTTTGACT ATGTGACAGG CGAAACAGAA
ACACTGCTGC TGGTACAGCC TAAGAACAGC ATGATGTTAC TCTTATCGCT GGGTAAAATG
ATGGCAGGTG GATTGTTATT TACTGCCGTG ATCATTACTG CATTTATACT CACTATCCGG
ACAATGCTGA ATCAGAAGAA ATTGTCGGAG ATCAAATCAG ACTTTATCAA CAACATGACG
CATGAACTGA AAACACCATT GGCCACGATC TCGCTGGCTA TTGATGCTAT CGGTAATGAA
AAGGTCATGG ACAACAGGGA TAAGATCCGT TACTTCTCTG GTATCATCAA AGAGGAGAAC
AAGCGTATGA ACAAACAGGT AGAGAGCATC CTGCAATCTG CCTTACTGGA GAAGAATGAA
ATAGGACTGA ATCTGCAGGT GACAGATGTA CATGATGTAA TATCCAGCAC AGTAGAAAAT
CTGCAATTAC AGCTGGATGC AAAACAAGGT CACGCCGAAC TGCGACTGGA TGCAATCAAT
CCCATCATTA AAGCAGACGA TGTGCATTTC TCCAACGTAA TCTTCAATCT GCTGGATAAT
GCCATCAAGT ATTCAAAAGA AAACCTTGAG GTAGTGATAT CTACACACAA TACACGTAAA
AGCCTCATTA TTACAATAGC AGATAACGGT ATCGGTATGA GCCGTGACAC GATTTCCCGT
ATCTTTGAAA AATTCTATCG TGCACATACA GGTAATGTGC ATAACGTAAA AGGATTCGGA
TTGGGATTAA GTTATGTGAA AGCCATCGTG GATGCCCATA AAGGCAAGAT CAAAGTAGAA
AGCACGATGG GGAAGGGTAG TAAGTTTACA TTGGAATTTC CACAAGAATA G
 
Protein sequence
MVPLKKVFPI IVVLITLSLL GIIWIQVNWI YNAAIVRREQ MEQRAVNVML DVKEKMLQRK 
APPMRFKVDG AAIRPTEKGL AIDKYEITNT IDLTTSVSDR FTTREVQEMI AKSLREQHLD
TTFEFAILGK GHFGNSNGIR MQSAGLSKML ENTTSSDSLD YTFQYIPLVN SFDYVTGETE
TLLLVQPKNS MMLLLSLGKM MAGGLLFTAV IITAFILTIR TMLNQKKLSE IKSDFINNMT
HELKTPLATI SLAIDAIGNE KVMDNRDKIR YFSGIIKEEN KRMNKQVESI LQSALLEKNE
IGLNLQVTDV HDVISSTVEN LQLQLDAKQG HAELRLDAIN PIIKADDVHF SNVIFNLLDN
AIKYSKENLE VVISTHNTRK SLIITIADNG IGMSRDTISR IFEKFYRAHT GNVHNVKGFG
LGLSYVKAIV DAHKGKIKVE STMGKGSKFT LEFPQE