Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7070 |
Symbol | |
ID | 8363262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8846258 |
End bp | 8847628 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644969203 |
Product | histidine kinase |
Protein accession | YP_003126672 |
Protein GI | 256426019 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACCAT TGAAGAAAGT ATTTCCCATA ATTGTGGTGT TAATTACCCT GTCATTATTG GGAATCATCT GGATCCAGGT TAACTGGATC TATAACGCCG CTATCGTACG TCGCGAGCAG ATGGAACAGC GCGCAGTAAA CGTAATGCTG GACGTGAAGG AGAAGATGCT TCAACGTAAA GCGCCTCCTA TGCGTTTTAA AGTAGATGGC GCTGCCATCC GGCCTACTGA AAAGGGATTG GCGATTGATA AGTATGAGAT CACCAATACT ATCGATCTGA CAACGAGTGT CAGCGATCGC TTCACAACAA GAGAAGTGCA GGAGATGATC GCTAAAAGTC TGCGTGAGCA ACACCTGGAT ACAACATTCG AATTTGCCAT ATTGGGTAAA GGTCATTTTG GCAATAGCAA CGGCATCCGT ATGCAATCTG CCGGATTGTC CAAAATGCTT GAAAATACCA CCAGCTCAGA TAGCCTTGAC TATACGTTCC AGTATATACC ACTGGTGAAT AGCTTTGACT ATGTGACAGG CGAAACAGAA ACACTGCTGC TGGTACAGCC TAAGAACAGC ATGATGTTAC TCTTATCGCT GGGTAAAATG ATGGCAGGTG GATTGTTATT TACTGCCGTG ATCATTACTG CATTTATACT CACTATCCGG ACAATGCTGA ATCAGAAGAA ATTGTCGGAG ATCAAATCAG ACTTTATCAA CAACATGACG CATGAACTGA AAACACCATT GGCCACGATC TCGCTGGCTA TTGATGCTAT CGGTAATGAA AAGGTCATGG ACAACAGGGA TAAGATCCGT TACTTCTCTG GTATCATCAA AGAGGAGAAC AAGCGTATGA ACAAACAGGT AGAGAGCATC CTGCAATCTG CCTTACTGGA GAAGAATGAA ATAGGACTGA ATCTGCAGGT GACAGATGTA CATGATGTAA TATCCAGCAC AGTAGAAAAT CTGCAATTAC AGCTGGATGC AAAACAAGGT CACGCCGAAC TGCGACTGGA TGCAATCAAT CCCATCATTA AAGCAGACGA TGTGCATTTC TCCAACGTAA TCTTCAATCT GCTGGATAAT GCCATCAAGT ATTCAAAAGA AAACCTTGAG GTAGTGATAT CTACACACAA TACACGTAAA AGCCTCATTA TTACAATAGC AGATAACGGT ATCGGTATGA GCCGTGACAC GATTTCCCGT ATCTTTGAAA AATTCTATCG TGCACATACA GGTAATGTGC ATAACGTAAA AGGATTCGGA TTGGGATTAA GTTATGTGAA AGCCATCGTG GATGCCCATA AAGGCAAGAT CAAAGTAGAA AGCACGATGG GGAAGGGTAG TAAGTTTACA TTGGAATTTC CACAAGAATA G
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Protein sequence | MVPLKKVFPI IVVLITLSLL GIIWIQVNWI YNAAIVRREQ MEQRAVNVML DVKEKMLQRK APPMRFKVDG AAIRPTEKGL AIDKYEITNT IDLTTSVSDR FTTREVQEMI AKSLREQHLD TTFEFAILGK GHFGNSNGIR MQSAGLSKML ENTTSSDSLD YTFQYIPLVN SFDYVTGETE TLLLVQPKNS MMLLLSLGKM MAGGLLFTAV IITAFILTIR TMLNQKKLSE IKSDFINNMT HELKTPLATI SLAIDAIGNE KVMDNRDKIR YFSGIIKEEN KRMNKQVESI LQSALLEKNE IGLNLQVTDV HDVISSTVEN LQLQLDAKQG HAELRLDAIN PIIKADDVHF SNVIFNLLDN AIKYSKENLE VVISTHNTRK SLIITIADNG IGMSRDTISR IFEKFYRAHT GNVHNVKGFG LGLSYVKAIV DAHKGKIKVE STMGKGSKFT LEFPQE
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