Gene Cpin_7069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7069 
Symbol 
ID8363261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8845337 
End bp8846149 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content48% 
IMG OID644969202 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003126671 
Protein GI256426018 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAA TCGAAAAAGA ACTTGCGCAT TTTAAACACG CTATTGCCGT TCCGGGTATG 
GGTGTTGCAA TGCAGGAAAA ACTGAAGGAA ACGCGCGTAT TGGTAGTAGG CGCCGGTGGA
TTGGGATCTC CGGTGATACA GTATTTAAGC GCAAGTGGCG TTGGTGTAAT CGGTATTGCC
GATTATGGTG TAATTACTGA TGAAGATATG CACAGGCAAC CCATCTATCA GATGCAGGAC
CTGCGTAAAC ATAAGGCTAA AATGGCTGCC AGCCGCTTGT GGGCGAGCAA TCCTTTTACC
AAACATTATC CTTTACTGTT ACAGGTAAAG CCGGAAAATA TTAAACAACT GCTGGAAGGT
ATGGACCTCG TGATCGATTG TTCCCAGCAT CATGCGACGC ATCTCGTGAT CAACGATGCC
TGTGTGGCGC ATGGTAAACC TTTCGTGATC GGTGAGGTAC ATAACTGGGT GTCCTGGTGG
GCAGGTTTTA ATATCGCGCC CGCCAGTGGT GATGCAGCTG CTTCTTACCG TTGTAACCTC
GACATGATCG ATGATCACCG TAATTTCGAT GCAGGCGCTA TCGGTGTTAC ACATGGTGCT
ACGGGTATGA TGATCGTGAA TGAAGTGCTG AAATACATTG CCGGTGTACC TGACGGGCTG
GCCAACAAAT TCTATAGCAT GAATTTCCTG CATAACACCT ACCAGGTGAA CACACTGTTC
CCGGATGCCG GTATACTGGC GGATATCAGG GCGAAAGGCG TGCTGACAGC AGAAGAATAT
GGTATAGACA TCGTACCGGA TATTGAAGAC TAA
 
Protein sequence
MALIEKELAH FKHAIAVPGM GVAMQEKLKE TRVLVVGAGG LGSPVIQYLS ASGVGVIGIA 
DYGVITDEDM HRQPIYQMQD LRKHKAKMAA SRLWASNPFT KHYPLLLQVK PENIKQLLEG
MDLVIDCSQH HATHLVINDA CVAHGKPFVI GEVHNWVSWW AGFNIAPASG DAAASYRCNL
DMIDDHRNFD AGAIGVTHGA TGMMIVNEVL KYIAGVPDGL ANKFYSMNFL HNTYQVNTLF
PDAGILADIR AKGVLTAEEY GIDIVPDIED