| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7064 |
|---|
| Symbol | |
|---|
| ID | 8363256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8839952 |
|---|
| End bp | 8840512 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644969197 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_003126666 |
|---|
| Protein GI | 256426013 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3654] Prophage maintenance system killer protein |
|---|
| TIGRFAM ID | [TIGR01550] death-on-curing family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGT TTAATCAGCG TAATGCTATG GATGCCAACG AGTCTGCACA GTTGCAGCGC
GTACTTAGCG ACTACACCTA TGCCCTGGAC GTACTGGATA AGTACGATCA TCAATTGCTG
GAAATAGAAA ATACGACAGC GGAAAACCTG TTTGTTATTA CTTACGAAAC AGCTATGCTC
GCTATTAACG GGTTAAGAGA CCGTTTTGGA GGAAGCGCAC TGTTCGGTAA TGAAAAAGAT
GATTCTTTTC AGGGTTCACT GGCGGCGATC TGCCAGACTT TTGGTGGTCA GTATCTCTAT
CCCAGTGTGG AAGAGAAGGC GGCCCATCTC TTATATTTTG TGATTAAGAA CCACTCTTTT
TCCGACGGGA ATAAGCGGAT CGCAGCATTT CTGTTTGTAT GGTTCCTGGA AAAGAACAAC
CTCCTCTACG GGCAGGACGG TCGTAAAAGA ATTGCGGACA ATGCCCTGGT AGCATTCACC
CTGATGATTG CGGAATCAAA ACCGGAGGAA AAGGAGATGA TGGTAAAAGT GATCGTACAT
CTTATCAACA GTAAGAATTA A
|
|---|
| Protein sequence | MNQFNQRNAM DANESAQLQR VLSDYTYALD VLDKYDHQLL EIENTTAENL FVITYETAML
AINGLRDRFG GSALFGNEKD DSFQGSLAAI CQTFGGQYLY PSVEEKAAHL LYFVIKNHSF
SDGNKRIAAF LFVWFLEKNN LLYGQDGRKR IADNALVAFT LMIAESKPEE KEMMVKVIVH
LINSKN
|
|---|
| |