| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7025 |
|---|
| Symbol | |
|---|
| ID | 8363217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8790349 |
|---|
| End bp | 8790774 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644969158 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_003126627 |
|---|
| Protein GI | 256425974 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATGCC TGGGCAATAT TTGCCGTTCG CCCCTGGCAG AAGGTATTTT AAGGCACCTT
GCCGTTCAGC AGGGACTGAA CTGGGAAGTA GATTCAGCCG GTACAGGCAA CTGGCATGTC
GGTGATCCGC CCGACCGCCG CTCTGTAAAA GTCGCTCAGC GCCACGGTAT TGACATATCC
GGCCTGCGTG GCCGTCAGTT CCAGACCGCT GATTTTGACG AATTTGACCG CATATTTGCA
ATGGACCTGA ATAATTACAG GGATATCATT CTGAAGGCCC GCACCGAAGA AGACAAGGCA
AAAGTGCAGC TGCTGCTGGA CGATCAGCAA CCGGTTCCCG ATCCATGGTA CGACGATGCC
CTGTTCGATC CGGTATACAA AATGATATAT GATGCCTGCG AAAAAATCGT TGCAGGTAAA
AAATAA
|
|---|
| Protein sequence | MVCLGNICRS PLAEGILRHL AVQQGLNWEV DSAGTGNWHV GDPPDRRSVK VAQRHGIDIS
GLRGRQFQTA DFDEFDRIFA MDLNNYRDII LKARTEEDKA KVQLLLDDQQ PVPDPWYDDA
LFDPVYKMIY DACEKIVAGK K
|
|---|
| |