| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7021 |
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| Symbol | |
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| ID | 8363213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8786971 |
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| End bp | 8788686 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969154 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003126623 |
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| Protein GI | 256425970 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC GGAAAAGTTT AATTGTTGCA ATGCTGTGCG TCGCGAACGG CGCTATGGCT
CAATCTGTGG AAGATGGATT GAAAGACCTG TATTATGGCA AGTATGAAAC AGCCAAACAG
ACGCTGGAAA AAGTTATTGC AGCTAAACCT ACAGAAGACA AAGCATATTA TTATCTGGGT
ATTGCACAGT TAGGAATGCA TGATGACGCC GGTGCCGCTG CTACTTTCAC AAAAGGGCTG
CAGGCTGTAC CGACCTCTTC ACTCCTGCAG GTGGGTATGG GACGCCTTGA TCTGAAAAAA
GGTGATGCAG CTGCTGCAAA ACAGAAATTT GATGCAGCCA GCACAGCTAC TGAAGGTCGT
GACGGCGATG TAGCACGTGC TATCGCTGAC GCCAGCAGCG AAATCAAAGG TGGTGACCGC
GGTTATGCAT TGTCAGTAAT GGAAAAACTC CTGAACAATG AAGGCCGTAA GAAAAAACAG
ATCTACAATC CAATTGCTGC CGATTATATC GAGTTAGGTG ATGCTTATCG TTACCTGGGT
GGTGAAAATG GTGGTAAAGC CATCACTTCC TACGATAAAG CACTGGAACT GGATCAGAAC
AACGCAGAAG CGGTAATGAA ACAGGGTCTG GTAAACTACA ACGCAAAACT GTTACAGGAT
GCGGTGAACG ACTGGACCAA GGCTACCAAC ATGGATCCTA ACTATGCGCC TGCTTATTTC
GAACTGTATC AGTTCTATAT TACTCCAACC AAAGCGCAGC TTTCCCTGGA AAATGCAGCG
AAATACCTGG AGAAATATAT GGCGGCAGTA GGTGAGGGTG CCGGTAAAGT TGAAAATGAA
TACAACCTGG CTGCGATCTC TTTCTACAGA AAAGATTATG ATGCAGCTAT CAACAAAGCG
AAAGGTGTAC TGCCACAGAC GAATGAAACC AACAAAGGTA AATTCGTTCG CCTGCTGACA
GATGCTTATC TGCAGAAAGG TGATACCGCT ACGGGCAGAC AGGTCATCGA AGAGTACGTG
AAAACTGTCG GCGACAGCAA ACTGGAAGCG AACGACTACA AACTGTTGAG CGCTATCTAC
CAGCAGCATG TAACAGATTC CGCACAGGAA GCTGTTAACG ATTCACTGGC AGGTCTGTAC
ATGGAGAAAT ACGCTCTGGC TGATACCGCT AAAGATGCTG AGAAATACAG AACCGTTGCA
GAGAACTTCA AATCTATGCA CGACTTCAAA CGTTCAGCTG AATGGTATGG CAGACTGGTG
AATGATTTCA CTGACGAACA GAACACTGGT AAAGTACAGG ATATGTTCTT CAAAGGTACT
ATGGAGATCT ATGCACGTCA GTACGATGCA GCAGATTCAA CCTGGGGTGC TTTCGCTGCT
AAATATCCTA ACAACGAGGC TTTAGGTATC TACTGGAGAG GCCGTGCTAA CATGGCGAAA
GATCCGGAAG CAAAAGACGG TGCTGCAGTA CCATATTTCC AGAAATTCTT TGAGATCAAA
GGTGATGAAA AGATGAAACC AGCTCAGCTG ATGTTCCCTT ATCAGTACAT GATGATCTAC
TACTATAACA AAGATGATCA GGCGAATATG AAGATCTGGA TGGATAAGGT AACTGCTATC
GATCCAAGCA ATGCAACTGT AAAGGCTATC CAGGAAAACA TGGATAACAA GAACAAAGCA
GCTGCTGCAA AACCAGCTCA GGGTAACAAA AAATAA
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| Protein sequence | MNRRKSLIVA MLCVANGAMA QSVEDGLKDL YYGKYETAKQ TLEKVIAAKP TEDKAYYYLG
IAQLGMHDDA GAAATFTKGL QAVPTSSLLQ VGMGRLDLKK GDAAAAKQKF DAASTATEGR
DGDVARAIAD ASSEIKGGDR GYALSVMEKL LNNEGRKKKQ IYNPIAADYI ELGDAYRYLG
GENGGKAITS YDKALELDQN NAEAVMKQGL VNYNAKLLQD AVNDWTKATN MDPNYAPAYF
ELYQFYITPT KAQLSLENAA KYLEKYMAAV GEGAGKVENE YNLAAISFYR KDYDAAINKA
KGVLPQTNET NKGKFVRLLT DAYLQKGDTA TGRQVIEEYV KTVGDSKLEA NDYKLLSAIY
QQHVTDSAQE AVNDSLAGLY MEKYALADTA KDAEKYRTVA ENFKSMHDFK RSAEWYGRLV
NDFTDEQNTG KVQDMFFKGT MEIYARQYDA ADSTWGAFAA KYPNNEALGI YWRGRANMAK
DPEAKDGAAV PYFQKFFEIK GDEKMKPAQL MFPYQYMMIY YYNKDDQANM KIWMDKVTAI
DPSNATVKAI QENMDNKNKA AAAKPAQGNK K
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