Gene Cpin_7015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7015 
Symbol 
ID8363207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8783415 
End bp8783900 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID644969148 
ProductNADH-quinone oxidoreductase, E subunit 
Protein accessionYP_003126617 
Protein GI256425964 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTG AAGAGAAGCT GAATAAAGTA AAAGAGATCA TCGCCCGTTA CCCGGCAGGG 
AAACAGAAGA GTGCCCTGAT TCCGGTGCTG CACCTGGCAC AGGAAGTATC TGGCGGATGG
CTTAGTTCGG AGACCATGGA TTACGTGGCT TCCCTGCTGC AGATCACGCC GATCGAAGTG
TACGAGGTGG CTACCTTTTA CTCGATGTTT AACCTGCAAC CTGTAGGCCG GTACGTATTT
GAGGTCTGCC AGACAGGCCC GTGTATGCTG CGTGGTTCAG ATAACATCAT TGACTATATT
AAAAAGAAAC TGGACATCGG TGTAGGTCAA ACTACAAAAG ATGGCCTGTT CACCCTCAAA
ACAGTAGAGT GCCTTGGCGC CTGCGGATAT GCTCCGATGA TGCAGCTGGG TAAACATTAC
CGTGAGCACC TGACCCCTGA GAAGGTAGAT GCAATCATTG AGGAATGCAG AAGTAAAGCA
AACTAA
 
Protein sequence
MFSEEKLNKV KEIIARYPAG KQKSALIPVL HLAQEVSGGW LSSETMDYVA SLLQITPIEV 
YEVATFYSMF NLQPVGRYVF EVCQTGPCML RGSDNIIDYI KKKLDIGVGQ TTKDGLFTLK
TVECLGACGY APMMQLGKHY REHLTPEKVD AIIEECRSKA N