Gene Cpin_7007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7007 
Symbol 
ID8363199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8774933 
End bp8776369 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content47% 
IMG OID644969140 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_003126609 
Protein GI256425956 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000110203 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACAG TATTACTCAT ATTGATTCCT TTAGTTGCGG GCCTGGTTAC GTTTGGTCTG 
AAGGGGTCTG GCCCTAAAGC GCTGGGTTTG GTGGCATCCC TGGCTTCGCT GGCAGTAACA
GTTGCTGCTT TGTTCCAGTT CAGGACTGCA CCGGATGCGT TGCAGCTGAC AGCAAACTGG
ATTCCTCAGC TGGGCGCACA GTTCAGTGTA GGGCTGGATG GAATGGGCCT GATGCTTTGT
TTGCTGACAG CCATTTCTTT TCTGCTGATC TTGATCGTTA TCTATAACAG AGAATATGAG
CGCCCTAACA GTTTCTATGG TCTGATGCTG TTGTCTCAGG CTGGTCTGGT AGGTGTGTTC
ACCGCGTATG ACGCTTTGTT ATTCTACGTT TTCTGGGAAC TGGCACTGAT TCCCGTGTAT
TTCCTCTGCT CACTCTGGGG TGGCGAAAAA CGTATTCCAG TTACATTTAA ATTCTTTGTA
TACACCTTTG CAGGTTCCCT GTTAATGCTG GTAGGTCTGA TCTATATCTA CCTGCAAACG
CCGGAGCATT CTTTCAGCTA CGCCAGTTTT GTAAGCGGCG CTATTACTCC ACAGGACCAG
TCCTGGTTGT TCTGGCTCTT CTTCGTAGCA TTTGCTATCA AGATGCCGAT CTTCCCTTTC
CACACCTGGC AGCCTGATAC TTACGAACAA TCACCTACCC CTGTTACAAT GGTACTGTCA
GGTATCATGG TGAAAATGGG TCTTTTCGGT GTTGTCCGCT GGTTACTGCC TGTACTGCCG
AAAGGCGCTT ATATGTGGTC AGATGTTGCG ATCGTACTGT CTATCATCGG TATCATCTAT
GCATCCTGCA TCGCGATCGT ACAGTCAGAC ATCAAACGCC TGATCGCTTA CTCTTCCATC
GCCCACATCG GTCTGATGAG TGCAGCTATC TTCACTAATA ATGAGCAGAG CTTACAGGGT
CTGATGGTGC AGATGTTCAA CCATGGTATC AACATTATTG GTTTGTGGAT CATCGTTGAG
ATTATCCAGA ACCGTCTGAA AATTAAGAAC CTGAACGAGA TGGGTGGTAT TGCGCAGTAT
GCACCGGGTA TTGCCATCTT CCTCGTAACC ATCAGTCTTG CCAATATCGC TTTACCACTG
ACCAACGGTT TCATCGGGGA GTTCCTGATG TTAAGTGGTC TGTTCCAGTA CAATGTTTGG
TTCATGGCTG TAGCCGGACT GGGTATCATC CTGGGAGCGG TATACACGCT GAACATGGTG
CAGAAAGTGA TCTTCGGACA GAGTAATCAG CTGACTGAAA CGACTACAGA TCTGAAAGGA
AATGAGTTGC TGGTACTGAT TATCATTGTA GGTATTATCC TGGTACTGGG TTTCTATCCG
AAGCCTATGC TGGAGCTGGT AAGCAGCACT ACTGAATTGG TTAACAAGGT TTATTAA
 
Protein sequence
MLTVLLILIP LVAGLVTFGL KGSGPKALGL VASLASLAVT VAALFQFRTA PDALQLTANW 
IPQLGAQFSV GLDGMGLMLC LLTAISFLLI LIVIYNREYE RPNSFYGLML LSQAGLVGVF
TAYDALLFYV FWELALIPVY FLCSLWGGEK RIPVTFKFFV YTFAGSLLML VGLIYIYLQT
PEHSFSYASF VSGAITPQDQ SWLFWLFFVA FAIKMPIFPF HTWQPDTYEQ SPTPVTMVLS
GIMVKMGLFG VVRWLLPVLP KGAYMWSDVA IVLSIIGIIY ASCIAIVQSD IKRLIAYSSI
AHIGLMSAAI FTNNEQSLQG LMVQMFNHGI NIIGLWIIVE IIQNRLKIKN LNEMGGIAQY
APGIAIFLVT ISLANIALPL TNGFIGEFLM LSGLFQYNVW FMAVAGLGII LGAVYTLNMV
QKVIFGQSNQ LTETTTDLKG NELLVLIIIV GIILVLGFYP KPMLELVSST TELVNKVY